Genome‐wide association study identifies QTLs conferring salt tolerance in rice

A cytosolic NAD+-dependent GPDH from maize (ZmGPDH1) is involved in conferring salt and osmotic stress tolerance

(2019) Ying Zhao et al.   BMC PLANT BIOLOGY

Calcium-activated 14-3-3 proteins as a molecular switch in salt stress tolerance

(2019) Zhijia Yang et al.   Nature Communications

Diversity and haplotypes of rice genotypes for seedling stage salinity tolerance analyzed through morpho-physiological and SSR markers

(2018) K.T. Ravikiran et al.   FIELD CROPS RESEARCH

Genome-Wide Analysis of Multidrug and Toxic Compound Extrusion (MATE) Family in Diploid Cotton, Gossypium raimondii and Gossypium arboreum and Its Expression Analysis Under Salt, Cadmium and Drought Stress

(2018) Pu Lu et al.   G3-Genes Genomes Genetics

Mining Halophytes for Plant Growth-Promoting Halotolerant Bacteria to Enhance the Salinity Tolerance of Non-halophytic Crops

(2018) Hassan Etesami et al.   Frontiers in Microbiology

Rice transcription factor OsMADS25 modulates root growth and confers salinity tolerance via the ABA–mediated regulatory pathway and ROS scavenging

(2018) Ning Xu et al.   PLoS Genetics

Natural variation reveals that OsSAP16 controls low-temperature germination in rice

(2017) Xiang Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic dissection of top three leaf traits in rice using progenies from a japonica  × indica cross

(2017) Changbin Yin et al.   Journal of Integrative Plant Biology

SNP-based analysis of genetic diversity reveals important alleles associated with seed size in rice

(2016) Weijie Tang et al.   BMC PLANT BIOLOGY

Association mapping and genetic dissection of nitrogen use efficiency-related traits in rice (Oryza sativa L.)

(2016) Zhiyi Liu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Molecular Dissection of Seedling Salinity Tolerance in Rice (Oryza sativa L.) Using a High-Density GBS-Based SNP Linkage Map

(2016) Teresa B. De Leon et al.   Rice

Genome-wide association mapping of salinity tolerance in rice (Oryza sativa)

(2015) V. Kumar et al.   DNA RESEARCH

Genetic structure, linkage disequilibrium and association mapping of salt tolerance in japonica rice germplasm at the seedling stage

(2015) Hongliang Zheng et al.   MOLECULAR BREEDING

Elevated Levels of CYP94 Family Gene Expression Alleviate the Jasmonate Response and Enhance Salt Tolerance in Rice

(2015) Ken-ichi Kurotani et al.   PLANT AND CELL PHYSIOLOGY

Identification of salt tolerance-improving quantitative trait loci alleles from a salt-susceptible rice breeding line by introgression breeding

(2015) Xianjin Qiu et al.   PLANT BREEDING

The Rice High-Affinity Potassium Transporter1;1 Is Involved in Salt Tolerance and Regulated by an MYB-Type Transcription Factor

(2015) Rong Wang et al.   PLANT PHYSIOLOGY

Overexpression ofPYL5in rice enhances drought tolerance, inhibits growth, and modulates gene expression

(2014) Hyunmi Kim et al.   JOURNAL OF EXPERIMENTAL BOTANY

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice

(2014) P. Y. Lam et al.   PLANT PHYSIOLOGY

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

(2012) Bryan Howie et al.   NATURE GENETICS

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets

(2011) Miao-Xin Li et al.   HUMAN GENETICS

Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm

(2011) Xuehui Huang et al.   NATURE GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Structure of a cation-bound multidrug and toxic compound extrusion transporter

(2010) Xiao He et al.   NATURE

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Genetic manipulation of Japonica rice using the OsBADH1 gene from Indica rice to improve salinity tolerance

(2010) Supaporn Hasthanasombut et al.   PLANT CELL TISSUE AND ORGAN CULTURE

RAS1, a quantitative trait locus for salt tolerance and ABA sensitivity in Arabidopsis

(2010) Z. Ren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

QTLs mapping of physiological traits related to salt tolerance in young rice seedlings

(2009) H. Sabouri et al.   BIOLOGIA PLANTARUM

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

SRWD: A novel WD40 protein subfamily regulated by salt stress in rice (OryzasativaL.)

(2008) Ji Huang et al.   GENE

OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice

(2008) K. Yokosho et al.   PLANT PHYSIOLOGY

Association mapping of iron deficiency chlorosis loci in soybean (Glycine max L. Merr.) advanced breeding lines

(2008) Ju Wang et al.   THEORETICAL AND APPLIED GENETICS

Status and Prospects of Association Mapping in Plants

(2008) Chengsong Zhu et al.   Plant Genome