Transcriptional landscape of pathogen‐responsive lnc RNA s in rice unveils the role of ALEX 1 in jasmonate pathway and disease resistance

microRNA-mediated R gene regulation: molecular scabbards for double-edged swords

(2018) Yingtian Deng et al.   Science China-Life Sciences

A Versatile Vector Toolkit for Functional Analysis of Rice Genes

(2018) Feng He et al.   Rice

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

(2018) Wensheng Wang et al.   NATURE

Overexpressing lncRNA LAIR increases grain yield and regulates neighbouring gene cluster expression in rice

(2018) Ying Wang et al.   Nature Communications

Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA

(2018) Xinyue Zhao et al.   Nature Communications

Long noncoding RNAs involve in resistance to Verticillium dahliae , a fungal disease in cotton

(2017) Lin Zhang et al.   PLANT BIOTECHNOLOGY JOURNAL

ELF18-INDUCED LONG-NONCODING RNA Associates with Mediator to Enhance Expression of Innate Immune Response Genes in Arabidopsis

(2017) Jun Sung Seo et al.   PLANT CELL

Advances in understanding broad-spectrum resistance to pathogens in rice

(2017) Yinggen Ke et al.   PLANT JOURNAL

Conservation analysis of long non-coding RNAs in plants

(2017) Pingchuan Deng et al.   Science China-Life Sciences

Grass phasiRNAs and male fertility

(2017) Yang Yu et al.   Science China-Life Sciences

An expression atlas of miRNAs in Arabidopsis thaliana

(2017) Le Xu et al.   Science China-Life Sciences

Evolution to the rescue: using comparative genomics to understand long non-coding RNAs

(2016) Igor Ulitsky   NATURE REVIEWS GENETICS

A DNA-based real-time PCR assay for robust growth quantification of the bacterial pathogen Pseudomonas syringae on Arabidopsis thaliana

(2016) Annegret Ross et al.   Plant Methods

RNA ‘Information Warfare’ in Pathogenic and Mutualistic Interactions

(2016) Thomas Chaloner et al.   TRENDS IN PLANT SCIENCE

Identification and characterization of long non-coding RNAs involved in osmotic and salt stress in Medicago truncatula using genome-wide high-throughput sequencing

(2015) Tian-Zuo Wang et al.   BMC PLANT BIOLOGY

Long non-coding RNAs and their functions in plants

(2015) Julia A Chekanova   CURRENT OPINION IN PLANT BIOLOGY

Jasmonates counter plant stress: A Review

(2015) Tariq Ahmad Dar et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypiumspp.)

(2015) Maojun Wang et al.   NEW PHYTOLOGIST

Long noncoding RNA transcriptome of plants

(2015) Jun Liu et al.   PLANT BIOTECHNOLOGY JOURNAL

Small RNAs and Gene Network in a Durable Disease Resistance Gene—Mediated Defense Responses in Rice

(2015) Hanming Hong et al.   PLoS One

Novel Insights into Rice Innate Immunity Against Bacterial and Fungal Pathogens

(2014) Wende Liu et al.   Annual Review of Phytopathology

Transcriptional control of plant defence responses

(2014) Pierre Buscaill et al.   CURRENT OPINION IN PLANT BIOLOGY

Rice OsPAD4functions differently from Arabidopsis AtPAD4in host-pathogen interactions

(2014) Yinggen Ke et al.   PLANT JOURNAL

Evolutionary conservation of cold-induced antisense RNAs of FLOWERING LOCUS C in Arabidopsis thaliana perennial relatives

(2014) Loren Castaings et al.   Nature Communications

Genome-wide discovery and characterization of maize long non-coding RNAs

(2014) Lin Li et al.   GENOME BIOLOGY

Rice versus Xanthomonas oryzae pv. oryzae: a unique pathosystem

(2013) Haitao Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

Roles of Plant Hormones and Their Interplay in Rice Immunity

(2013) Dong-Lei Yang et al.   Molecular Plant

Long noncoding RNAs responsive toFusarium oxysporuminfection inArabidopsis thaliana

(2013) Qian-Hao Zhu et al.   NEW PHYTOLOGIST

Phased, Secondary, Small Interfering RNAs in Posttranscriptional Regulatory Networks

(2013) Q. Fei et al.   PLANT CELL

Highly sensitive and quantitative profiling of acidic phytohormones using derivatization approach coupled with nano-LC–ESI-Q-TOF-MS analysis

(2012) Ming-Luan Chen et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Cis-acting noncoding RNAs: friends and foes

(2012) Sònia Guil et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Effects of jasmonic acid, branching and girdling on carbon and nitrogen transport in poplar

(2012) Heidi M. Appel et al.   NEW PHYTOLOGIST

Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis

(2012) J. Liu et al.   PLANT CELL

The rice hydroperoxide lyase OsHPL3 functions in defense responses by modulating the oxylipin pathway

(2012) Xiaohong Tong et al.   PLANT JOURNAL

Activation of the Jasmonic Acid Pathway by Depletion of the Hydroperoxide Lyase OsHPL3 Reveals Crosstalk between the HPL and AOS Branches of the Oxylipin Pathway in Rice

(2012) Xiaoqiang Liu et al.   PLoS One

A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice

(2012) J. Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and SBS sequencing

(2011) Mingming Xin et al.   BMC PLANT BIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Methyl jasmonate elicits rapid changes in carbon and nitrogen dynamics in tomato

(2010) Sara Gómez et al.   NEW PHYTOLOGIST

Vernalization-Mediated Epigenetic Silencing by a Long Intronic Noncoding RNA

(2010) J. B. Heo et al.   SCIENCE