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Title
mRNA structure determines modification by pseudouridine synthase 1
Authors
Keywords
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Journal
Nature Chemical Biology
Volume 15, Issue 10, Pages 966-974
Publisher
Springer Science and Business Media LLC
Online
2019-09-03
DOI
10.1038/s41589-019-0353-z
References
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Related references
Note: Only part of the references are listed.- SWISS-MODEL: homology modelling of protein structures and complexes
- (2018) Andrew Waterhouse et al. NUCLEIC ACIDS RESEARCH
- TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code
- (2017) Modi Safra et al. GENOME RESEARCH
- MODOMICS: a database of RNA modification pathways. 2017 update
- (2017) Pietro Boccaletto et al. NUCLEIC ACIDS RESEARCH
- The complete chemical structure ofSaccharomyces cerevisiaerRNA: partial pseudouridylation of U2345 in 25S rRNA by snoRNA snR9
- (2016) Masato Taoka et al. NUCLEIC ACIDS RESEARCH
- Messenger RNA modifications: Form, distribution, and function
- (2016) W. V. Gilbert et al. SCIENCE
- Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome
- (2015) Xiaoyu Li et al. Nature Chemical Biology
- Predicting RNA 3D structure using a coarse-grain helix-centered model
- (2015) Peter Kerpedjiev et al. RNA
- The RNA structurome: transcriptome-wide structure probing with next-generation sequencing
- (2015) Chun Kit Kwok et al. TRENDS IN BIOCHEMICAL SCIENCES
- Transcriptome-wide Mapping Reveals Widespread Dynamic-Regulated Pseudouridylation of ncRNA and mRNA
- (2014) Schraga Schwartz et al. CELL
- Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells
- (2014) Thomas M. Carlile et al. NATURE
- Transcriptome-Wide Mapping of Pseudouridines: Pseudouridine Synthases Modify Specific mRNAs in S. cerevisiae
- (2014) Alexander F. Lovejoy et al. PLoS One
- A Pseudouridine Residue in the Spliceosome Core Is Part of the Filamentous Growth Program in Yeast
- (2014) Anindita Basak et al. Cell Reports
- PEAR: a fast and accurate Illumina Paired-End reAd mergeR
- (2013) J. Zhang et al. BIOINFORMATICS
- In Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target Selectivities
- (2013) Nadine Czudnochowski et al. JOURNAL OF MOLECULAR BIOLOGY
- LoQAtE—Localization and Quantitation ATlas of the yeast proteomE. A new tool for multiparametric dissection of single-protein behavior in response to biological perturbations in yeast
- (2013) Michal Breker et al. NUCLEIC ACIDS RESEARCH
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- Genome-wide measurement of RNA secondary structure in yeast
- (2010) Michael Kertesz et al. NATURE
- PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots
- (2009) Yanga Byun et al. BIOINFORMATICS
- RNA Sequence and Two-dimensional Structure Features Required for Efficient Substrate Modification by theSaccharomyces cerevisiaeRNA:Ψ-Synthase Pus7p
- (2008) Alan Urban et al. JOURNAL OF BIOLOGICAL CHEMISTRY
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