4.6 Article

Tridentate Schiff base coordinated trigonal bipyramidal/square pyramidal copper(II) complexes: Synthesis, crystal structure, DFT/TD-DFT calculation, catecholase activity and DNA binding

Journal

JOURNAL OF MOLECULAR STRUCTURE
Volume 1189, Issue -, Pages 94-101

Publisher

ELSEVIER
DOI: 10.1016/j.molstruc.2019.03.098

Keywords

Copper(II) complexes; Cocrystal; Crystal structure; DFT/TD-DFT calculation; DNA binding

Funding

  1. CSIR, Government of India [01 (2743)/13/EMR-II]

Ask authors/readers for more resources

Using tridentate O,N,O/N,N,O donor Schiff bases and 1,10-phenanthroline, five coordinated copper(II) complexes, {[Cu(L-1)(Phen)][Cu(L-1)(Phen)] center dot 5H(2)O}(1) and {[Cu(L-2)(phen)](ClO4)}(2) [H2L-1 = 3-[(2-hydroxy-benzylidene)-amino]-propionic acid, HL2 = 2- methoxy-6-[(3-methylamino-propylimino)-methyl]-phenol, phen = 1,10-phenanthroline] have been synthesized and structurally characterized. Complex 1 is a co-crystal, where two geometrically different (trigonal bipyramidal (TBP) and square pyramidal (SP)) complexes of same compositions [Cu(L-1)(phen)] are within a unit cell. Complex 2 exhibits a trigonal bipyramidal geometry and counter balanced by perchlorate anion. In solid state, complex 1 contains both SP and TBP geometries, but theoretical calculation reveals that in solution it exists only in one form with SP geometry. DFT/TD-DFT calculations for the complexes were performed to explain the structures and electronic spectral properties of the complexes. Both the complexes are active for catalytic oxidation of 3,5-di-tert-butylcatechol (3,5-DTBC) to 3,5-di-tert-butylquinone (3,5-DTBQ) in presence of molecular oxygen and the calculated values of turnover numbers are 62 +/- 3 and 52 +/- 3 h(-1) for 1 and 2, respectively. Interactions of complexes with calf thymus-DNA have been studied using fluorescence spectroscopic techniques and the calculated values of binding constants are (2.20 +/- 0.06) x 10(4) and (2.27 +/- 0.07) x 10(4)L mol(-1) for complexes 1 and 2, respectively. (C) 2019 Elsevier B.V. All rights reserved.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.6
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Chemistry, Multidisciplinary

Tetranuclear and 1D Polymeric Cd(II) Complexes with a Tetrapyridyl Imidazolidine Ligand: Synthesis, Structure, and Fluorescence Sensing Activity

Aparup Paul, Ennio Zangrando, Apu Patra, Manas Kumar Mahish, Dama Saren, Hyuma Masu, Subal Chandra Manna

CRYSTAL GROWTH & DESIGN (2020)

Article Chemistry, Inorganic & Nuclear

Low temperature hydrothermal synthesis of Na3Fe2(PO4)2F3 and its cathode electrochemistry in Na- and Li-ion batteries

Subal Chandra Manna, Prashanth Sandineni, Amitava Choudhury

Summary: Na3Fe2(PO4)(2)F-3 was successfully synthesized under mild hydrothermal conditions. The compound's structure was determined using single-crystal X-ray diffraction, confirming the accuracy of the P4(2)/mnm space group. Electrochemical studies showed stable capacity retention over long cycles in Li-ion batteries, but a decreasing capacity in Na-ion batteries after approximately 35 cycles.

JOURNAL OF SOLID STATE CHEMISTRY (2021)

Article Chemistry, Inorganic & Nuclear

Bidentate Schiff base coordinated square planer nickel(II) complexes: Synthesis, crystal structure, DFT/TD-DFT calculation and DNA/protein binding

Apu Patra, Horst Puschmann, Subal Chandra Manna

Summary: Two mononuclear square planer Ni(II) complexes have been synthesized and characterized through X-ray single crystal structure determination and DFT/TDDFT calculation. These complexes show high intrinsic binding constants with DNA, serum albumin, etc. as revealed by UV-vis absorption and emission spectroscopic techniques.

POLYHEDRON (2021)

Article Chemistry, Inorganic & Nuclear

Cu(II)-Na(I) heterometallic coordination compounds as photocatalyst for degradation of methylene blue

Aparup Paul, Ennio Zangrando, Valerio Bertolasi, Subal Chandra Manna

Summary: Two new Cu(II)/Na(I) coordination polymers were synthesized using different Schiff bases and anions, both of which showed good photocatalytic activity. Complex 1 contains dinuclear copper(II) species, while complex 2 consists of stair-like 1D polymers.

INORGANICA CHIMICA ACTA (2021)

Article Chemistry, Inorganic & Nuclear

Linear dicarboxylato and tridentate chelating ligands coordinated Cu(II) complexes: Syntheses, crystal structures, protein binding and cytotoxicity studies

Apu Patra, Osheen Sahay, Manas Kumar Mahish, Mahua Rani Das, Dama Saren, Aparup Paul, Pavel Vojtisek, Manas Kumar Santra, Subal Chandra Manna

Summary: In this study, three dinuclear copper(II) complexes were synthesized, characterized, and their interactions with bovine serum albumin (BSA) were investigated, as well as their cytotoxicity on breast cancer cell lines and normal breast epithelial cells. The results showed that these complexes exhibit high binding affinity and cytotoxicity, significantly inhibiting breast cancer cell growth while also showing some toxicity towards normal cells.

POLYHEDRON (2022)

Article Chemistry, Applied

Carboxylato- and squarato-bridged dinuclear/tetranuclear Cu(II) complexes: Synthesis, magnetic property, and protein binding studies

Apu Patra, Luca M. Carrella, Dama Saren, Manas Kumar Mahish, Ennio Zangrando, Horst Puschmann, Eva Rentschler, Subal Chandra Manna

Summary: Two new Cu(II) complexes were synthesized and characterized. The structural determination showed that the Schiff base acts as a tridentate ligand coordinating the copper(II) atoms to give comparable Cu(L) entities in both complexes. Magnetic measurements revealed antiferromagnetic coupling in both complexes. Additionally, the interaction of the complexes with hen egg lysozyme was investigated by spectroscopic techniques.

APPLIED ORGANOMETALLIC CHEMISTRY (2022)

Article Chemistry, Physical

Synthesis, crystal structure, electrochemistry and thermal analysis of an oxalato bridged Cr(III)-Pb(II) heterometallic coordination compound

Apurba Bhunia, Ennio Zangrando, Snehadrinarayan Khatua, Subal Chandra Manna

Summary: A novel oxalato bridged Cr(III)-Pb(II) compound was synthesized and characterized, showing fluorescence and redox properties, as well as good thermal stability. The complex exhibited fluorescence at room temperature and irreversible redox peaks corresponding to the Cr+3/Cr-2(+) couple. The compound started to decompose at 33.7 degrees C and collapsed at around 277 degrees C, indicating its thermal stability.

JOURNAL OF MOLECULAR STRUCTURE (2022)

Article Chemistry, Inorganic & Nuclear

Opposing magnetic communications in two dinuclear Ni(II) complexes: Ferromagnetic Ni-N-Ni and antiferromagnetic Ni-O-Ni moiety

Apu Patra, Luca M. Carrella, Pavel Vojtisek, Eva Rentschler, Subal Chandra Manna

Summary: Two dinuclear Ni(II) complexes were synthesized and characterized. The complexes exhibit ferromagnetic interaction between the nickel(II) centers, and the magnetic properties were successfully simulated using the isotropic exchange Hamilton operator. The structures of the complexes were theoretically optimized, and the experimental UV-vis electronic absorption spectra were compared with the theoretical results.

POLYHEDRON (2022)

Article Chemistry, Multidisciplinary

Stereocontrolled intramolecular transformations of (-)-α santonin

A. N. Iskanderov, P. Voitishek, S. K. Zhokizhanova, A. A. Dzhadenova, N. Merkhatuly

Summary: Chemical transformations of eudesmane sesquiterpene gamma-lactones have become a significant direction in medicinal chemistry, leading to the synthesis of new biologically active compounds. This article discusses the intramolecular transformations of (-)-alpha santonin, a naturally occurring compound with a wide spectrum of biological activity. The stereoselective synthesis of cis-condensed keto-eudesmane esters and ethylated santonin derivatives was successfully achieved, and the proposed mechanism of formation of 6-keto-eudesmane ethers was confirmed through the synthesis of C-4-alpha-ethyl-santonin. The structure and spatial structure of the synthesized compounds were determined using various modern research methods.

CHEMICAL BULLETIN OF KAZAKH NATIONAL UNIVERSITY (2022)

Article Chemistry, Multidisciplinary

Tryptophan moiety ligand based tri/tetranuclear Ni(II) complexes: syntheses, structure and magnetic properties

Manas Kumar Mahish, Luca M. Carrella, Apu Patra, Dama Saren, Ennio Zangrando, Pavel Vojtisek, Eva Rentschler, Subal Chandra Manna

Summary: Tetra/trinuclear Ni(II) complexes have been synthesized and characterized. The X-ray single crystal structure determination shows that one complex is tetranuclear and the other is trinuclear, resulting from the competition between the coordination ability of the benzoate anion and the Schiff base. The magnetic susceptibility data indicate weak antiferromagnetic interactions in both complexes.

NEW JOURNAL OF CHEMISTRY (2022)

Article Chemistry, Multidisciplinary

Phosphorylation of glycoluryl derivatives with phosphorus pentachloride

L. K. Salkeeva, A. A. Muratbekova, E. Minayeva, P. Voitichek, E. K. Tayshibekova, A. R. Dostanova, A. B. Tateeva, A. K. Salkeeva

Summary: The research presented in the paper focuses on the synthesis and study of new organophosphorus derivatives based on pentavalent phosphorus, with a specific interest in N-acyl-substituted glycoluril. Experimental results demonstrate that the reaction proceeds with prolonged heating under argon for at least 48 hours to obtain the desired product. The resulting white crystalline substance, an unstable diphosphonic complex, decomposes rapidly in air, forming a corresponding dichlorophosphate derivative.

BULLETIN OF THE UNIVERSITY OF KARAGANDA-CHEMISTRY (2021)

Article Chemistry, Inorganic & Nuclear

Field-induced slow magnetic relaxation in mixed valence di- and tri-nuclear CoII-CoIII complexes

Aparup Paul, Marta Viciano-Chumillas, Horst Puschmann, Joan Cano, Subal Chandra Manna

DALTON TRANSACTIONS (2020)

Article Multidisciplinary Sciences

Electro-catalytic hydrogen evolution and magnetic behavior of N-doped-rGO supported NixPy

Arnab Pal, Kalyanashis De, Ramaprasad Maiti, Subal Chandra Manna, Kuntal Chatterjee

SN APPLIED SCIENCES (2020)

Article Chemistry, Physical

Nine Cd2+ complexes containing 3,5-dimethylpyrazole and carboxylic acids: Synthesis, spectroscopic and crystallographic characterization

Xinlei Chen, Shiyi Chen, Xuele Lin, Jingxuan Zhou, Xingjun Gao, Yaoqi Zhen, Xiaodan Ma, Shouwen Jin, Linfang Shi, Hui Liu, Daqi Wang

Summary: Nine mixed-ligand Cd2+ complexes with different geometric structures were synthesized and characterized. The complexes exhibit various coordination modes and form both intra- and intermolecular hydrogen bonds.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Investigation on photo-isomeric impurity of Roxadustat: Structure conformation, physicochemical characterization, interconversion feasibility and in vitro toxicological evaluation

Rupali Mahajan, Abhishek Sharma, Bhagyashree Patra, Lijo Mani, Parul Grover, Sandeep Kumar, Santosh Kumar Guru, Gananadhamu Samanthula, Amol G. Dikundwar, Amit Asthana

Summary: This research article provides a comprehensive characterization and toxicological assessment of a photoisomeric impurity of the antianemic drug Roxadustat. The impurity has a distinct structure compared to the drug and its formation due to light exposure is a concern. Through various experiments, including single crystal XRD, physicochemical characterization, and in vitro cytotoxicity assays, the researchers confirmed the structure of the impurity, evaluated its conversion with Roxadustat, and assessed its toxicological activity. These findings contribute to the understanding of drug stability, safety, and formulation development.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Enhancing the optical, electrical, dielectric properties and antimicrobial activity of chitosan/gelatin incorporated with Co-doped ZnO nanoparticles: Nanocomposites for use in energy storage and food packaging

Laila S. Alqarni, Azzah M. Alghamdi, Nuha Y. Elamin, A. Rajeh

Summary: The solution casting method was used to produce a new type of nanocomposites made of chitosan, gelatin, and co-doped ZnO nanoparticles. The addition of 3.5% co-doped ZnO nanoparticles improved the physicochemical characteristics and antimicrobial effects of the nanocomposites, indicating their significant potential in food packaging and energy storage.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Unraveling non-covalent interactions in bis-chalcone: A crystallographic and theoretical studies

Ruchi Gaur

Summary: The structure and intermolecular interactions of a newly synthesized bis-chalcone THXA were studied using experimental and computational methods. The importance of non-covalent interactions such as pi center dot center dot center dot pi, C-H center dot center dot center dot S, and C-H center dot center dot center dot pi was revealed.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Hyaluronic acid drug conjugates for the treatment of skin hyperpigmentation

Andrii Bazylevich, Leonid Patsenker, Sarit Aviel-Ronen, Gary Gellerman

Summary: Drug combination therapy is commonly used for treating various skin disorders, but its effectiveness is often limited. In this study, researchers synthesized conjugates of anti-pigmenting drugs and hyaluronic acid (HA) to improve treatment efficacy. These HA-drug conjugates exhibited measurable drug release profiles and demonstrated superior depigmentation effects compared to control groups in a swine model.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Molecular structures of eight hydrogen bond-mediated minoxidil adducts from different aryl acids

Xiaodan Ma, Xinlei Chen, Yaoqi Zhen, Xunjie Zheng, Chengzhe Shi, Shouwen Jin, Bin Liu, Bin Chen, Daqi Wang

Summary: Cocrystallization experiments between minoxidil and aryl acids coformers resulted in the successful formation of multi-component samples. The nature of these samples was determined using various techniques and their structural and supramolecular aspects were investigated. The outcomes revealed the importance of nonbonding contacts and different types of interactions in stabilizing and expanding the crystal structures.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Nucleophilic transformation of 3-substituted-6,8-dimethylchromones with phenylhydrazine under various reaction conditions: Theoretical, spectroscopic characterization and in silico ADME studies

Najla A. Alshaye, Magdy A. Ibrahim, Al-Shimaa Badran

Summary: The chemical behavior of 3-substituted-6,8-dimethylchromones towards phenylhydrazine was examined. Different reaction conditions produced various products, and the molecular geometries and reactivity descriptors of the compounds were also investigated. The results suggest that these compounds are suitable for nonlinear optical applications.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Synthesis, spectroscopic characterizations, DFT calculations and molecular docking studies of new quinoline-oxirane/piperidine/morpholine hybrids from quinoline gem-dicyanoepoxide

Hayette Alliouche, Houria Bouria, Rafik Bensegueni, Mounia Guergouri, Abdelmalek Bouraiou, Ali Belfaitah

Summary: In this paper, a combined experimental and theoretical study was conducted to synthesize and characterize new 2-quinolone-piperidine and -morpholine hybrids. The results from experiments were validated using computational calculations, and the affinity between these compounds and Acetylcholinesterase/Butyrylcholinesterase was estimated through molecular docking.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

A significantly fluorescence-enhanced probe for Al3+based on a new AIEgens Mn-based metal-organic frameworks

Wei-Min Chen, Juan-Juan Shao, Yi Zhang, Zhen-Dong Xue, Peng-Lai Liu, Jian-Ling Ni, Li-Zhuang Chen, Qiang Gao, Fang-Ming Wang

Summary: This study synthesized and characterized a novel Mn-based LMOF, and achieved good results in detecting heavy metal Al3+ in water, showing good stability, high selectivity and sensitivity. This provides new insights into the potential applications of Mn-based MOFs in chemical sensing.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

One-pot cocrystallization of mononuclear and 1D cobalt(II) complexes based on flexible triclopyr and 2,2′-bipyridine coligands: Structural analyses, conformation comparison, non-covalent interactions and magnetic properties

Jun-Xia Li, Yi-Jing Lu, Ke-Ying Quan, Li-Bing Wu, Xun Feng, Wei-Zhou Wang

Summary: This study synthesized two cobalt(II) complexes and analyzed their crystal structures using single-crystal X-ray diffraction. The results showed that the crystal structures of these complexes were different, and they exhibited different crystal packing and magnetic properties.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Synthesis and characterization of supramolecular assembly probenecid cocrystal

Yang Li, Yan Zhang, Hong Xu, Min Li, Zhen Li, Zi-yu Song, Ji-shi Chen, Yan-Jun Liu, Yong Sun, Zhao Yang

Summary: This study reports the synthesis and solid-state characterization of a new pharmaceutical cocrystal, PRO-BPE, which can enhance the solubility of the highly water-insoluble prodrug probenecid. The PRO-BPE cocrystals were found to have superior water solubility compared to pure PRO. This research provides valuable insights into improving the solubility of poorly soluble drugs.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Water soluble spiropyran for Hg2+sensing in water

Lucas G. B. Felicio, Bianca B. M. Vieira, Ivana S. Lula, Renata Diniz, Frank Alexis, Flavio B. Miguz, Frederico B. De Sousa

Summary: A novel spiropyran derivative was synthesized for heavy metals sensing in water. The results demonstrated that the new derivative can serve as a rapid, sensitive, and simple tool for detecting Hg2+ ions in water with high selectivity.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Preparation and performance of superhydrophobic surfaces with low surface energy modified attapulgite

Junqing Meng, Jie Wang, Lijuan Wang, Chunhui Lyu, Haiyan Chen, Yingpei Lyu, Baisheng Nie

Summary: Material modification with low surface energy can achieve lower surface free energy on micro-and nano-rough structures, which is crucial for developing superhydrophobic surfaces. In this study, attapulgite (APT) was modified with alkylamine, alkylammonium salt, and stearic acid, and the interaction between low surface materials and attapulgite was explained. The results showed that the hydrophobicity of APT was significantly modified by the modifiers, and the surface free energy of the composites first decreased and then increased with increasing molecular number of low surface energy monomers.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

One-pot synthesis of ligand-free highly active Pd catalyst supported on NiFe spinel oxide for Suzuki-Miyaura cross-coupling reaction

Karan Goswami, Dipak Das, Parthasarathi Bera, Sounak Roy, Md. Motin Seikh, Prasanta Kumar Sinha, Arup Gayen

Summary: This work presents the development of a simple and highly active heterogeneous Pd catalyst for Suzuki-Miyaura carbon-carbon cross-coupling reaction. The NiPdFe-1 catalyst shows the best activity and stability among the prepared catalysts. It efficiently promotes the coupling reaction between aryl bromide and phenyl boronic acid under mild reaction conditions with high isolated yields.

JOURNAL OF MOLECULAR STRUCTURE (2024)

Article Chemistry, Physical

Design, development and characterization of the Apremilast and Indomethacin coamorphous system

Ekta Pardhi, Devendra Singh Tomar, Rahul Khemchandani, Gananadhamu Samanthula, Pankaj Kumar Singh, Neelesh Kumar Mehra

Summary: The main aim of this study was to prepare a drug-drug coamorphous system to improve the physiochemical properties, solubility and stability of Apremilast and Indomethacin. Various solid-state characterization techniques were used to characterize the prepared system. Molecular level interactions were studied using molecular modeling and ATR-FTIR and 1H NMR. Solubility and dissolution studies showed the benefits of the coamorphous system. The system was found to be stable for a period of five months. Permeation study also demonstrated improved flux for both drugs compared to their crystalline forms. The coamorphous system showed anti-psoriatic and anti-melanogenic activity based on molecular docking results. Overall, the developed CAM-based supersaturated system exhibited improved physicochemical properties and physical stability.

JOURNAL OF MOLECULAR STRUCTURE (2024)