Comparison and Phylogenetic Analysis of Chloroplast Genomes of Three Medicinal and Edible Amomum Species

Development of chloroplast microsatellite markers for Glyptostrobus pensilis (Cupressaceae)

(2019) Ya-Dan Yan et al.   Applications in Plant Sciences

Parallelization of MAFFT for large-scale multiple sequence alignments

(2018) Tsukasa Nakamura et al.   BIOINFORMATICS

Authentication of Herbal Medicines Dipsacus asper and Phlomoides umbrosa Using DNA Barcodes, Chloroplast Genome, and Sequence Characterized Amplified Region (SCAR) Marker

(2018) Inkyu Park et al.   MOLECULES

Complete chloroplast genome of the medicinal plant Amomum compactum: gene organization, comparative analysis, and phylogenetic relationships within Zingiberales

(2018) Ming-li Wu et al.   Chinese Medicine

Identification of Ligularia Herbs Using the Complete Chloroplast Genome as a Super-Barcode

(2018) Xinlian Chen et al.   Frontiers in Pharmacology

Therapeutic Effect of Amomum villosum on Inflammatory Bowel Disease in Rats

(2018) Zhu Chen et al.   Frontiers in Pharmacology

Comparative Chloroplast Genome Analysis of Rhubarb Botanical Origins and the Development of Specific Identification Markers

(2018) Yuxin Zhou et al.   MOLECULES

Molecular Structure and Phylogenetic Analyses of Complete Chloroplast Genomes of Two Aristolochia Medicinal Species

(2017) Jianguo Zhou et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The Complete Amomum kravanh Chloroplast Genome Sequence and Phylogenetic Analysis of the Commelinids

(2017) Mingli Wu et al.   MOLECULES

Complete Chloroplast Genome of Medicinal Plant Lonicera japonica: Genome Rearrangement, Intron Gain and Loss, and Implications for Phylogenetic Studies

(2017) Liu He et al.   MOLECULES

Complete chloroplast genome sequences of Schisandra chinensis: genome structure, comparative analysis, and phylogenetic relationship of basal angiosperms

(2017) Haojie Guo et al.   Science China-Life Sciences

The Complete Plastome Sequences of Four Orchid Species: Insights into the Evolution of the Orchidaceae and the Utility of Plastomic Mutational Hotspots

(2017) Zhitao Niu et al.   Frontiers in Plant Science

The Chloroplast Genome Sequence of Scutellaria baicalensis Provides Insight into Intraspecific and Interspecific Chloroplast Genome Diversity in Scutellaria

(2017) Dan Jiang et al.   Genes

Gene losses and partial deletion of small single-copy regions of the chloroplast genomes of two hemiparasitic Taxillus species

(2017) Ying Li et al.   Scientific Reports

The Complete Chloroplast Genome Sequence of the Medicinal Plant Swertia mussotii Using the PacBio RS II Platform

(2016) Beibei Xiang et al.   MOLECULES

A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation

(2016) Rafael D Acemel et al.   NATURE GENETICS

Development of Chloroplast Microsatellite Markers for the Endangered Maianthemum bicolor (Asparagaceae s.l.)

(2016) Hana Park et al.   Applications in Plant Sciences

Evolution of codon usage in Zika virus genomes is host and vector specific

(2016) Azeem Mehmood Butt et al.   Emerging Microbes & Infections

Complete chloroplast DNA sequences of Zanduri wheat (Triticum spp.)

(2015) M. Gogniashvili et al.   GENETIC RESOURCES AND CROP EVOLUTION

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

SNP Typing for Germplasm Identification of Amomum villosum Lour. Based on DNA Barcoding Markers

(2014) Qionglin Huang et al.   PLoS One

Complete Chloroplast Genome Sequence of Poisonous and Medicinal Plant Datura stramonium: Organizations and Implications for Genetic Engineering

(2014) Yang Yang et al.   PLoS One

Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses

(2013) Jun-Bo Yang et al.   BMC EVOLUTIONARY BIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Development of simple sequence repeat (SSR) markers from a genome survey of Chinese bayberry (Myrica rubra)

(2012) Yun Jiao et al.   BMC GENOMICS

CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences

(2012) Chang Liu et al.   BMC GENOMICS

Evaluation of multi-activities of 14 edible species from Zingiberaceae

(2012) Chuan-Li Lu et al.   INTERNATIONAL JOURNAL OF FOOD SCIENCES AND NUTRITION

Development and Characterization of 18 Novel EST-SSRs from the Western Flower Thrips, Frankliniella occidentalis (Pergande)

(2012) Xian-Ming Yang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Complete cpDNA genome sequence of Smilax china and phylogenetic placement of Liliales – Influences of gene partitions and taxon sampling

(2012) Juan Liu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The Function of Introns

(2012) Michal Chorev et al.   Frontiers in Genetics

Chloroplast microsatellite markers in Liriodendron tulipifera (Magnoliaceae) and cross-species amplification in L. chinense

(2011) A.-H. Yang et al.   AMERICAN JOURNAL OF BOTANY

Chloroplast genomes of photosynthetic eukaryotes

(2011) Beverley R. Green   PLANT JOURNAL

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Advances in chloroplast engineering

(2009) Huan-Huan Wang et al.   Journal of Genetics and Genomics