4.7 Article

Crossbar-Net: A Novel Convolutional Neural Network for Kidney Tumor Segmentation in CT Images

Journal

IEEE TRANSACTIONS ON IMAGE PROCESSING
Volume 28, Issue 8, Pages 4060-4074

Publisher

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/TIP.2019.2905537

Keywords

Deep convolutional neural network; kidney tumors; crossbar-net; image segmentation; CT images

Funding

  1. NSFC [61432008, 61673203]
  2. Young Elite Scientists Sponsorship Program by CAST [YESS 2016QNRC001]
  3. CCF-Tencent Open Research Fund [RAGR 20180114]
  4. Projects of the Shandong Province Higher Educational Science and Technology Program [J18KA370, J15LN58]
  5. Project of the Shandong Medicine and Health Science Technology Development Plan [2017WSB04071]
  6. Shandong Province Science and Technology Development Plan Project [2014GSF118086]
  7. Zhejiang Key Technology Research Development Program [2018C03024]
  8. Jiangsu Key Technology Research Development Program [BE2017664]
  9. Suzhou Science and Technology Projects for People's Livelihood [SYS2018010]
  10. Suzhou Science and Technology Development Project [SZS201818]
  11. SND Medical Plan Project [2016Z010, 2017Z005]

Ask authors/readers for more resources

Due to the unpredictable location, fuzzy texture, and diverse shape, accurate segmentation of the kidney tumor in CT images is an important yet challenging task. To this end, we, in this paper, present a cascaded trainable segmentation model termed as Crossbar-Net. Our method combines two novel schemes: 1) we originally proposed the crossbar patches, which consists of two orthogonal non-squared patches (i.e., the vertical patch and horizontal patch). The crossbar patches are able to capture both the global and local appearance information of the kidney tumors from both the vertical and horizontal directions simultaneously. 2) With the obtained crossbar patches, we iteratively train two sub-models (i.e., horizontal sub-model and vertical sub-model) in a cascaded training manner. During the training, the trained sub-models are encouraged to become more focused on the difficult parts of the tumor automatically (i.e., mis-segmented regions). Specifically, the vertical (horizontal) sub-model is required to help segment the mis-segmented regions for the horizontal (vertical) sub-model. Thus, the two sub-models could complement each other to achieve the self-improvement until convergence. In the experiment, we evaluate our method on a real CT kidney tumor dataset which is collected from 94 different patients including 3500 CT slices. Compared with state-of-the-art segmentation methods, the results demonstrate the superior performance of our method on the Dice similarity coefficient, true positive fraction, centroid distance, and Hausdorff distance. Moreover, to exploit the generalization to other segmentation tasks, we also extend our Crossbar-Net to two related segmentation tasks: I) cardiac segmentation in MR images and 2) breast mass segmentation in X-ray images, showing the promising results for these two tasks. Our implementation is released at https://github.com/Qianyu1226/Crossbar-Net.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Chemistry, Multidisciplinary

Polymer-chelation approach to high-performance Fe-N x -C catalyst towards oxygen reduction reaction

Xue Wang, Li Zhang, Meiling Xiao, Junjie Ge, Wei Xing, Changpeng Liu, Jianbing Zhu

Summary: A polymerchelation strategy is used to disperse Fe-Nx active sites onto the carbon surface, resulting in a hierarchically porous structure and excellent conductivity. The optimal catalyst exhibits impressive oxygen reduction reaction activity, surpassing the Pt/C benchmark.

CHINESE CHEMICAL LETTERS (2023)

Article Cell Biology

Atorvastatin-induced tolerogenic dendritic cells improve cardiac remodeling by suppressing TLR-4/NF-κB activation after myocardial infarction

Qian Wang, Zhaoyang Chen, Junjie Guo, Xiaoping Peng, Zeqi Zheng, Hang Chen, Haibo Liu, Yuanji Ma, Jianbing Zhu

Summary: Our study found that atorvastatin-induced tDCs have a beneficial effect on post-infarction cardiomyocyte apoptosis and myocardial fibrosis, reducing inflammatory cell infiltration and inhibiting oxidative stress, likely through suppression of TLR-4/NF-kappa B activation.

INFLAMMATION RESEARCH (2023)

Review Chemistry, Multidisciplinary

Challenges and Strategies of Anion Exchange Membranes in Hydrogen-electricity Energy Conversion Devices

Jinsheng Li, Changpeng Liu, Junjie Ge, Wei Xing, Jianbing Zhu

Summary: Alkaline hydrogen-electricity energy conversion technologies, such as AEMFCs and AEMWEs, offer advantages over acidic counterparts, but face challenges in terms of AEM properties. This review examines the main obstacles of AEMs, including ion conductivity, stability, and device integration, and proposes strategies to address these challenges. The insights provided by this review can accelerate the commercialization of these promising hydrogen-electric energy conversion technologies.

CHEMISTRY-A EUROPEAN JOURNAL (2023)

Article Geriatrics & Gerontology

Olfactory functional covariance connectivity in Parkinson's disease: Evidence from a Chinese population

Shouyun Du, Yiqing Wang, Guodong Li, Hongyu Wei, Hongjie Yan, Xiaojing Li, Yijie Wu, Jianbing Zhu, Yi Wang, Zenglin Cai, Nizhuan Wang

Summary: This study analyzed the resting-state functional magnetic resonance data of a Chinese population comprising 14 patients with PD and 13 controls using the functional covariance connection strength method. It was found that patients with PD had abnormal connections between olfactory-related brain regions and white matter fiber bundles, which were associated with the symptoms of Parkinson's disease.

FRONTIERS IN AGING NEUROSCIENCE (2023)

Article Nanoscience & Nanotechnology

Regulating the MXene-Zinc Interfacial Structure toward a Highly Revisable Metal Anode of Zinc-Air Batteries

Di Yang, Jinsheng Li, Changpeng Liu, Junjie Ge, Wei Xing, Jianbing Zhu

Summary: In this study, a MXene/Zn metal anode interfacial structure with a protective layer of single/few-layer Ti3C2Tx MXene is designed to address the challenges faced by Zn metal anodes in alkaline electrolytes. The MXene layer isolates the direct contact between the Zn metal anodes and the electrolytes and inhibits zincate dissolution, resulting in improved cycle stability. The Ti3C2Tx-protected Zn metal anode demonstrates superior performance compared to the bare Zn counterpart, with stable operation for over 400 cycles at a high current density of 5.0 mA cm-2.

ACS APPLIED MATERIALS & INTERFACES (2023)

Article Cell Biology

HIF-1a-induced upregulated miR-322 forms a feedback loop by targeting Smurf2 and Smad7 to activate Smad3/β-catenin/HIF-1α, thereby improving myocardial ischemia-reperfusion injury

Wei Dong, Chen Dong, Jianbing Zhu, Yaofu Zheng, Junfei Weng, Leilei Liu, Yang Ruan, Xu Fang, Jin Chen, Wenyu Liu, Xiaoping Peng, Xuanying Chen

Summary: Myocardial ischemia/reperfusion injury (MIRI) is a major cause of heart failure after myocardial infarction. MiR-322 plays a role in regulating MIRI progression, and its mechanism involves the interaction between Smad7/Smurf2, HIF-1 alpha, and beta-catenin. The study demonstrates that upregulating miR-322 improves MIRI by activating the Smad3/beta-catenin pathway through targeting Smurf2 and Smad7, while the positive feedback loop between beta-catenin and HIF-1 alpha continuously enhances MIRI.

CELL BIOLOGY INTERNATIONAL (2023)

Article Engineering, Electrical & Electronic

Multi-Level Cascade Sparse Representation Learning for Small Data Classification

Wenyuan Zhong, Huaxiong Li, Qinghua Hu, Yang Gao, Chunlin Chen

Summary: Deep learning methods have attracted much attention for image classification recently. However, for small-scale data, these methods may not yield optimal results due to the lack of training samples. Sparse representation is efficient and interpretable, but its precision is not competitive. To address this issue, we propose a Multi-Level Cascade Sparse Representation (ML-CSR) learning method that combines the advantages of both deep learning and sparse representation. ML-CSR utilizes a pyramid structure and two core modules, Error-To-Feature (ETF) and Generate-Adaptive-Weight (GAW), to improve precision. Experiments on face databases demonstrate the effectiveness of ML-CSR, and ablation experiments further confirm the benefits of the proposed pyramid structure, ETF, and GAW modules. The code is available at https://github.com/Zhongwenyuan98/ML-CSR.

IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS FOR VIDEO TECHNOLOGY (2023)

Article Computer Science, Interdisciplinary Applications

PLN: Parasitic-Like Network for Barely Supervised Medical Image Segmentation

Shumeng Li, Heng Cai, Lei Qi, Qian Yu, Yinghuan Shi, Yang Gao

Summary: This paper proposes a novel barely-supervised segmentation setting with few sparsely-labeled images and a large amount of unlabeled images. By introducing a parasitic-like network, the collaboration of two modules is achieved through three stages of infection, development, and eclosion, providing accurate pseudo-labels for training. The results demonstrate that the framework achieves high performance on extremely sparse annotation tasks.

IEEE TRANSACTIONS ON MEDICAL IMAGING (2023)

Article Multidisciplinary Sciences

Customized reaction route for ruthenium oxide towards stabilized water oxidation in high-performance PEM electrolyzers

Zhaoping Shi, Ji Li, Yibo Wang, Shiwei Liu, Jianbing Zhu, Jiahao Yang, Xian Wang, Jing Ni, Zheng Jiang, Lijuan Zhang, Ying Wang, Changpeng Liu, Wei Xing, Junjie Ge

Summary: The reaction route plays a crucial role in determining the stability and catalytic performance of ruthenium-based catalysts. By controlling the charge of ruthenium, the reaction route can be customized, leading to improved stability and lifespan of the catalysts in electrolyzers.

NATURE COMMUNICATIONS (2023)

Article Computer Science, Artificial Intelligence

Effective Interpretable Policy Distillation via Critical Experience Point Identification

Xiao Liu, Shuyang Liu, Bo An, Yang Gao, Shangdong Yang, Wenbin Li

Summary: Interpretable policy distillation aims to convert a deep reinforcement learning policy into a self-explainable model, but it often fails to perform well on complex tasks. This research identifies the heavy-tailed nature of the experience distributions as a critical issue and proposes a method to characterize decision boundaries using minimum experience retention, resulting in improved distilled policies.

IEEE INTELLIGENT SYSTEMS (2023)

Article Computer Science, Artificial Intelligence

Online Passive-Aggressive Active Learning for Trapezoidal Data Streams

Yanfang Liu, Xiaocong Fan, Wenbin Li, Yang Gao

Summary: This study combines active query strategy and passive-aggressive update strategy, and proposes a novel online active learning algorithm for trapezoidal data streams. Experimental results confirm its effectiveness in learning from trapezoidal data streams.

IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS (2023)

Review Chemistry, Applied

Design strategy and comprehensive performance assessment towards Zn anode for alkaline rechargeable batteries

Di Yang, Jinsheng Li, Changpeng Liu, Wei Xing, Jianbing Zhu

Summary: Alkaline Zn-based primary batteries have been successful, but secondary batteries using Zn anodes face challenges due to poor cycle reversibility. Various degradation mechanisms contribute to the failures, and their interactions make it difficult to address all the issues with a single strategy. Therefore, a comprehensive evaluation of different strategies is important to commercialize alkaline Zn batteries. This review systematically analyzes the progress and performance of improvement strategies for Zn anodes in alkaline conditions, highlighting design strategies from the perspectives of ion and electron regulation and comparing their advantages and disadvantages based on comprehensive performance parameters.

JOURNAL OF ENERGY CHEMISTRY (2023)

Article Engineering, Electrical & Electronic

LogRegX: An Explainable Regression Network for Cross-Well Geophysical Logs Generation

Wenjun Lv, Chenhui Yuan, Jichen Wang, Jianbing Zhu, Yu Kang, Ji Chang

Summary: Geophysical logging instruments provide a feasible way to model fine borehole geology by continuously measuring multiple geophysical properties of borehole rocks. Machine learning has been demonstrated effective in generating missing well logs, but the independent and identical distribution assumption is not satisfied in the case of cross-well missing logs generation. To address this issue, we propose an explainable regression network named LogRegX, which integrates feature extraction, alignment, and missing logs prediction while maintaining feature explainability.

IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT (2023)

Proceedings Paper Operations Research & Management Science

A Real-Time Spacecraft Health Monitoring Embedded Software Based on Three Services of PUS

Xin Liu, Lu Han, Jian-Bing Zhu, Yong-Quan Wei

Summary: This paper introduces a new method to solve the problem of traditional spacecraft health state monitoring, which utilizes an on-board health monitoring embedded software to judge the spacecraft's health state based on real-time telemetry data and monitoring rules, and automatically handles anomalies. The software has been successfully applied in China Space Station and a remote sensing spacecraft agile platform, significantly improving the reliability of the spacecraft and reducing the cost of ground health monitoring.

APPLICATIONS OF DECISION SCIENCE IN MANAGEMENT, ICDSM 2022 (2023)

No Data Available