Developmentally regulated Shh expression is robust to TAD perturbations
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Title
Developmentally regulated Shh expression is robust to TAD perturbations
Authors
Keywords
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Journal
DEVELOPMENT
Volume 146, Issue 19, Pages dev179523
Publisher
The Company of Biologists
Online
2019-09-11
DOI
10.1242/dev.179523
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- (2015) William A. Flavahan et al. NATURE
- Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
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- My5C: web tools for chromosome conformation capture studies
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