Statistical Workflow for Feature Selection in Human Metabolomics Data

The Differential Effects of Eicosapentaenoic Acid and Docosahexaenoic Acid on Cardiometabolic Risk Factors: A Systematic Review

(2018) Jacqueline Innes et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Missing Value Imputation Approach for Mass Spectrometry-based Metabolomics Data

(2018) Runmin Wei et al.   Scientific Reports

Metabolomics biomarkers to predict acamprosate treatment response in alcohol-dependent subjects

(2017) David J. Hinton et al.   Scientific Reports

Metabolic Networks and Metabolites Underlie Associations Between Maternal Glucose During Pregnancy and Newborn Size at Birth

(2016) Denise M. Scholtens et al.   DIABETES

Improved batch correction in untargeted MS-based metabolomics

(2016) Ron Wehrens et al.   Metabolomics

A batch correction method for liquid chromatography–mass spectrometry data that does not depend on quality control samples

(2016) Martin Rusilowicz et al.   Metabolomics

Large-scale untargeted LC-MS metabolomics data correction using between-batch feature alignment and cluster-based within-batch signal intensity drift correction

(2016) Carl Brunius et al.   Metabolomics

A tutorial review: Metabolomics and partial least squares-discriminant analysis – a marriage of convenience or a shotgun wedding

(2015) Piotr S. Gromski et al.   ANALYTICA CHIMICA ACTA

1H-NMR urinary metabolomic profiling for diagnosis of gastric cancer

(2015) Angela W Chan et al.   BRITISH JOURNAL OF CANCER

Metabolite Profiling and Cardiovascular Event Risk: A Prospective Study of 3 Population-Based Cohorts

(2015) P. Wurtz et al.   CIRCULATION

Missing value imputation strategies for metabolomics data

(2015) Emily Grace Armitage et al.   ELECTROPHORESIS

Regularization Paths for Generalized Linear Models via Coordinate Descent

(2015) Jerome Friedman et al.   Journal of Statistical Software

Elevation of circulating branched-chain amino acids is an early event in human pancreatic adenocarcinoma development

(2014) Jared R Mayers et al.   NATURE MEDICINE

T3DB: the toxic exposome database

(2014) David Wishart et al.   NUCLEIC ACIDS RESEARCH

Large-scale Metabolomic Profiling Identifies Novel Biomarkers for Incident Coronary Heart Disease

(2014) Andrea Ganna et al.   PLoS Genetics

Random Forest in Clinical Metabolomics for Phenotypic Discrimination and Biomarker Selection

(2013) Tianlu Chen et al.   Evidence-based Complementary and Alternative Medicine

Sparse Partial-least-squares Discriminant Analysis for Different Geographical Origins ofSalvia miltiorrhizaby1H-NMR-based Metabolomics

(2013) Miaomiao Jiang et al.   PHYTOCHEMICAL ANALYSIS

Evaluation of the lasso and the elastic net in genome-wide association studies

(2013) Patrik Waldmann et al.   Frontiers in Genetics

A direct approach to sparse discriminant analysis in ultra-high dimensions

(2012) Q. Mai et al.   BIOMETRIKA

A Direct Estimation Approach to Sparse Linear Discriminant Analysis

(2012) Tony Cai et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

A Partial Least Squares based algorithm for parsimonious variable selection

(2011) Tahir Mehmood et al.   Algorithms for Molecular Biology

Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems

(2011) Kim-Anh Lê Cao et al.   BMC BIOINFORMATICS

A metabolomic study of low estimated GFR in non-proteinuric type 2 diabetes mellitus

(2011) D. P. K. Ng et al.   DIABETOLOGIA

Penalized classification using Fisher's linear discriminant

(2011) Daniela M. Witten et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Double-check: validation of diagnostic statistics for PLS-DA models in metabolomics studies

(2011) Ewa Szymańska et al.   Metabolomics

Sparse Discriminant Analysis

(2011) Line Clemmensen et al.   TECHNOMETRICS

Association of a Peripheral Blood Metabolic Profile With Coronary Artery Disease and Risk of Subsequent Cardiovascular Events

(2010) Svati H. Shah et al.   Circulation-Cardiovascular Genetics

Sparse partial least squares regression for simultaneous dimension reduction and variable selection

(2010) Hyonho Chun et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Expression Quantitative Trait Loci Mapping With Multivariate Sparse Partial Least Squares Regression

(2009) H. Chun et al.   GENETICS

Metabolomic applications of HILIC-LC-MS

(2009) Simon Cubbon et al.   MASS SPECTROMETRY REVIEWS

Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites

(2009) W. R. Wikoff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Combined Metabolomic and Proteomic Analysis of Human Atrial Fibrillation

(2008) Manuel Mayr et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Application of Metabolomics to Cardiovascular Biomarker and Pathway Discovery

(2008) Gregory D. Lewis et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Urine Metabolomics Analysis for Kidney Cancer Detection and Biomarker Discovery

(2008) Kyoungmi Kim et al.   MOLECULAR & CELLULAR PROTEOMICS

A Sparse PLS for Variable Selection when Integrating Omics Data

(2008) Kim-Anh Lê Cao et al.   Statistical Applications in Genetics and Molecular Biology

On Some Aspects of Variable Selection for Partial Least Squares Regression Models

(2007) Partha Pratim Roy et al.   Quantitative structure-activity relationships & combinatorial science