Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee

Taxonomic reassessment of N4-like viruses using comparative genomics and proteomics suggests a new subfamily - “Enquartavirinae”

(2015) Johannes Wittmann et al.   ARCHIVES OF VIROLOGY

Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm

(2015) Aurélia Caputo et al.   Biology Direct

Putative type 1 thymidylate synthase and dihydrofolate reductase as signature genes of a novel bastille-like group of phages in the subfamily Spounavirinae

(2015) Paul Tetteh Asare et al.   BMC GENOMICS

Integration of genomic and proteomic analyses in the classification of the Siphoviridae family

(2015) Evelien M. Adriaenssens et al.   VIROLOGY

A Suggested New Bacteriophage Genus, “Kp34likevirus”, within the Autographivirinae Subfamily of Podoviridae

(2015) Harald Eriksson et al.   Viruses-Basel

Microbial taxonomy in the post-genomic era: Rebuilding from scratch?

(2014) Cristiane C. Thompson et al.   ARCHIVES OF MICROBIOLOGY

Four Escherichia coli O157:H7 Phages: A New Bacteriophage Genus and Taxonomic Classification of T1-Like Phages

(2014) Yan D. Niu et al.   PLoS One

Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case

(2014) Sophie M. Colston et al.   mBio

Expanding the Marine Virosphere Using Metagenomics

(2013) Carolina Megumi Mizuno et al.   PLoS Genetics

My Life with Bacteriophage φ29

(2012) Margarita Salas   JOURNAL OF BIOLOGICAL CHEMISTRY

Gegenees: Fragmented Alignment of Multiple Genomes for Determining Phylogenomic Distances and Genetic Signatures Unique for Specified Target Groups

(2012) Joakim Ågren et al.   PLoS One

Genomics of Bacterial and Archaeal Viruses: Dynamics within the Prokaryotic Virosphere

(2011) M. Krupovic et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Phenotypic and genotypic variations within a single bacteriophage species

(2011) Pieter-Jan Ceyssens et al.   Virology Journal

Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs

(2010) Alexander F. Auch et al.   Standards in Genomic Sciences

Classification of Myoviridae bacteriophages using protein sequence similarity

(2009) Rob Lavigne et al.   BMC MICROBIOLOGY

Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools

(2008) Rob Lavigne et al.   RESEARCH IN MICROBIOLOGY