Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

(2018) Katherine R. Amato et al.   ISME Journal

Rates of gut microbiome divergence in mammals

(2018) Alex H. Nishida et al.   MOLECULAR ECOLOGY

Changes in the Gut Microbiota of Urban Subjects during an Immersion in the Traditional Diet and Lifestyle of a Rainforest Village

(2018) Kelly V. Ruggles et al.   mSphere

Thinking outside the cereal box: non-carbohydrate routes for dietary manipulation of the gut microbiota

(2018) Aspen T. Reese et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

US Immigration Westernizes the Human Gut Microbiome

(2018) Pajau Vangay et al.   CELL

Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania

(2017) Samuel A. Smits et al.   SCIENCE

Diet shifts provoke complex and variable changes in the metabolic networks of the ruminal microbiome

(2017) Sara M. Wolff et al.   Microbiome

Diet-induced extinctions in the gut microbiota compound over generations

(2016) Erica D. Sonnenburg et al.   NATURE

Captivity humanizes the primate microbiome

(2016) Jonathan B. Clayton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cospeciation of gut microbiota with hominids

(2016) A. H. Moeller et al.   SCIENCE

The Fiber Gap and the Disappearing Gut Microbiome: Implications for Human Nutrition

(2016) Edward C. Deehan et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns

(2016) Andres Gomez et al.   Cell Reports

Modulation of the faecal microbiome of healthy adult dogs by inclusion of potato fibre in the diet

(2015) Matthew R. Panasevich et al.   BRITISH JOURNAL OF NUTRITION

Metagenome Sequencing of the Hadza Hunter-Gatherer Gut Microbiota

(2015) Simone Rampelli et al.   CURRENT BIOLOGY

Temporal variation selects for diet–microbe co-metabolic traits in the gut of Gorilla spp

(2015) Andres Gomez et al.   ISME Journal

Gut microbiome composition and metabolomic profiles of wild western lowland gorillas (Gorilla gorilla gorilla) reflect host ecology

(2015) Andres Gomez et al.   MOLECULAR ECOLOGY

Subsistence strategies in traditional societies distinguish gut microbiomes

(2015) Alexandra J. Obregon-Tito et al.   Nature Communications

Fat, fibre and cancer risk in African Americans and rural Africans

(2015) Stephen J. D. O’Keefe et al.   Nature Communications

The Gut Microbiota of Rural Papua New Guineans: Composition, Diversity Patterns, and Ecological Processes

(2015) Inés Martínez et al.   Cell Reports

Variable responses of human and non-human primate gut microbiomes to a Western diet

(2015) Katherine R. Amato et al.   Microbiome

Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations

(2015) Özgün C O Umu et al.   Microbiome

Examining short-term nutritional status among BaAka foragers in transitional economies

(2014) Melissa J. Remis et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra)

(2014) Katherine R. Amato et al.   MICROBIAL ECOLOGY

Rapid changes in the gut microbiome during human evolution

(2014) Andrew H. Moeller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gut microbiome of the Hadza hunter-gatherers

(2014) Stephanie L. Schnorr et al.   Nature Communications

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Traditionally living populations in East Africa have a mean serum 25-hydroxyvitamin D concentration of 115 nmol/l

(2012) Martine F. Luxwolda et al.   BRITISH JOURNAL OF NUTRITION

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Nutritional geometry: gorillas prioritize non-protein energy while consuming surplus protein

(2011) J. M. Rothman et al.   Biology Letters

The Human Microbiome Project in 2011 and Beyond

(2011) Lita M. Proctor   Cell Host & Microbe

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Paleolithic Nutrition

(2010) Melvin Konner et al.   NUTRITION IN CLINICAL PRACTICE

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities

(2010) Howard Ochman et al.   PLOS BIOLOGY

Diet-dependent acid load, Paleolithic nutrition, and evolutionary health promotion

(2009) S Boyd Eaton et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Male and female western gorilla diet: Preferred foods, use of fallback resources, and implications for ape versus old world monkey foraging strategies

(2009) D. Doran-Sheehy et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Nutritional Value of Cassava for Use as a Staple Food and Recent Advances for Improvement

(2009) Julie A. Montagnac et al.   COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY

The NIH Human Microbiome Project

(2009) et al.   GENOME RESEARCH

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE