4.0 Article

Solid-state NMR sequential assignments of the N-terminal domain of HpDnaB helicase

Journal

BIOMOLECULAR NMR ASSIGNMENTS
Volume 10, Issue 1, Pages 13-23

Publisher

SPRINGER
DOI: 10.1007/s12104-015-9629-8

Keywords

HpDnaB; Assignments; Solid-state NMR; Secondary chemical shifts; ssFLYA

Funding

  1. Agence Nationale de la Recherche [ANR-11-BSV8-021-01, ANR-12-BS08-0013-01]
  2. ETH Zurich
  3. Swiss National Science Foundation [200020_159707, 200020_146757]
  4. Volkswagen Foundation
  5. CIBLE program from the Region Rhone-Alpes

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We present solid-state NMR assignments of the N-terminal domain of the DnaB helicase from Helicobacter pylori (153 residues) in its microcrystalline form. We use a sequential resonance assignment strategy based on three-dimensional NMR experiments. The resonance assignments obtained are compared with automated resonance assignments computed with the ssFLYA algorithm. An analysis of the C-13 secondary chemical shifts determines the position of the secondary structure elements in this alpha-helical protein.

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