iDS372, a Phenotypically Reconciled Model for the Metabolism of Streptococcus pneumoniae Strain R6
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
iDS372, a Phenotypically Reconciled Model for the Metabolism of Streptococcus pneumoniae Strain R6
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2019-06-25
DOI
10.3389/fmicb.2019.01283
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genome-Wide Semi-Automated Annotation of Transporter Systems
- (2017) Oscar Dias et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- Integration of Biomass Formulations of Genome-Scale Metabolic Models with Experimental Data Reveals Universally Essential Cofactors in Prokaryotes
- (2017) Joana C. Xavier et al. METABOLIC ENGINEERING
- Carbon catabolite repression by seryl phosphorylated HPr is essential toStreptococcus pneumoniaein carbohydrate-rich environments
- (2015) Eleanor Fleming et al. MOLECULAR MICROBIOLOGY
- Reconstructing genome-scale metabolic models with merlin
- (2015) Oscar Dias et al. NUCLEIC ACIDS RESEARCH
- Transcriptional and metabolic effects of glucose on Streptococcus pneumoniae sugar metabolism
- (2015) Laura Paixão et al. Frontiers in Microbiology
- Host Glycan Sugar-Specific Pathways in Streptococcus pneumonia: Galactose as a Key Sugar in Colonisation and Infection
- (2015) Laura Paixão et al. PLoS One
- Gene Elements that Regulate Streptococcus pneumoniae Virulence and Immunity Evasion
- (2013) Pamela A. Nieto et al. CURRENT GENE THERAPY
- Software platforms to facilitate reconstructing genome-scale metabolic networks
- (2013) Joshua J. Hamilton et al. ENVIRONMENTAL MICROBIOLOGY
- Environmental and Nutritional Factors That Affect Growth and Metabolism of the Pneumococcal Serotype 2 Strain D39 and Its Nonencapsulated Derivative Strain R6
- (2013) Sandra M. Carvalho et al. PLoS One
- Recent advances in pneumococcal peptidoglycan biosynthesis suggest new vaccine and antimicrobial targets
- (2012) Lok-To Sham et al. CURRENT OPINION IN MICROBIOLOGY
- Streptococcus pneumoniae Uses Glutathione To Defend against Oxidative Stress and Metal Ion Toxicity
- (2012) A. J. Potter et al. JOURNAL OF BACTERIOLOGY
- Novel Molecular Method for Identification of Streptococcus pneumoniae Applicable to Clinical Microbiology and 16S rRNA Sequence-Based Microbiome Studies
- (2012) Christian F. P. Scholz et al. JOURNAL OF CLINICAL MICROBIOLOGY
- CDD: conserved domains and protein three-dimensional structure
- (2012) Aron Marchler-Bauer et al. NUCLEIC ACIDS RESEARCH
- Contribution of a Genomic Accessory Region Encoding a Putative Cellobiose Phosphotransferase System to Virulence of Streptococcus pneumoniae
- (2012) Lauren J. McAllister et al. PLoS One
- Capsule Type of Streptococcus pneumoniae Determines Growth Phenotype
- (2012) Lucy J. Hathaway et al. PLoS Pathogens
- Isolation and analysis of cell wall components from Streptococcus pneumoniae
- (2011) Nhat Khai Bui et al. ANALYTICAL BIOCHEMISTRY
- An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks
- (2011) Michael Stelzer et al. Integrative Biology
- Characterization of Central Carbon Metabolism ofStreptococcus pneumoniaeby Isotopologue Profiling
- (2011) Tobias Härtel et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011
- (2011) J. D. Orth et al. Molecular Systems Biology
- OGEE: an online gene essentiality database
- (2011) Wei-Hua Chen et al. NUCLEIC ACIDS RESEARCH
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- CcpA Ensures Optimal Metabolic Fitness of Streptococcus pneumoniae
- (2011) Sandra M. Carvalho et al. PLoS One
- PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
- (2010) Nancy Y. Yu et al. BIOINFORMATICS
- OptFlux: an open-source software platform for in silico metabolic engineering
- (2010) Isabel Rocha et al. BMC Systems Biology
- Polyamine biosynthesis and transport mechanisms are crucial for fitness and pathogenesis of Streptococcus pneumoniae
- (2010) P. Shah et al. MICROBIOLOGY-SGM
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- BRENDA, the enzyme information system in 2011
- (2010) M. Scheer et al. NUCLEIC ACIDS RESEARCH
- Genome-Scale Model of Streptococcus thermophilus LMG18311 for Metabolic Comparison of Lactic Acid Bacteria
- (2009) M. I. Pastink et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14
- (2009) Feng Ding et al. BMC GENOMICS
- Pyruvate Formate Lyase Is Required for Pneumococcal Fermentative Metabolism and Virulence
- (2009) H. Yesilkaya et al. INFECTION AND IMMUNITY
- Comparative Genome-Scale Metabolic Reconstruction and Flux Balance Analysis of Multiple Staphylococcus aureus Genomes Identify Novel Antimicrobial Drug Targets
- (2009) D.-S. Lee et al. JOURNAL OF BACTERIOLOGY
- The Universal Protein Resource (UniProt) in 2010
- (2009) NUCLEIC ACIDS RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search