A Multicolor Fluorescence in situ Hybridization Approach Using an Extended Set of Fluorophores to Visualize Microorganisms

Characterization of the First “Candidatus Nitrotoga” Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

(2018) Katharina Kitzinger et al.   mBio

Microbial life on a sand grain: from bulk sediment to single grains

(2017) David Probandt et al.   ISME Journal

Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle

(2017) K. Dimitri Kits et al.   NATURE

Protists as bioindicators in activated sludge: Identification, ecology and future needs

(2016) Wilhelm Foissner   EUROPEAN JOURNAL OF PROTISTOLOGY

Biogeography of a human oral microbiome at the micron scale

(2016) Jessica L. Mark Welch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping the dynamics and nanoscale organization of synaptic adhesion proteins using monomeric streptavidin

(2016) Ingrid Chamma et al.   Nature Communications

MiL-FISH: Multilabeled Oligonucleotides for FluorescenceIn SituHybridization Improve Visualization of Bacterial Cells

(2015) Mario P. Schimak et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cyanate as an energy source for nitrifiers

(2015) Marton Palatinszky et al.   NATURE

Complete nitrification by Nitrospira bacteria

(2015) Holger Daims et al.   NATURE

Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes

(2015) Brian J. Beliveau et al.   Nature Communications

MiDAS: the field guide to the microbes of activated sludge

(2015) Simon Jon McIlroy et al.   Database-The Journal of Biological Databases and Curation

Functionally relevant diversity of closely related Nitrospira in activated sludge

(2014) Christiane Gruber-Dorninger et al.   ISME Journal

Nitrotoga-like bacteria are previously unrecognized key nitrite oxidizers in full-scale wastewater treatment plants

(2014) Sebastian Lücker et al.   ISME Journal

Bacterial fight-and-flight responses enhance virulence in a polymicrobial infection

(2014) A. Stacy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Methods for Analysis of Spatial Distribution and Coaggregation of Microbial Populations in Complex Biofilms

(2013) Robert Almstrand et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Interactions of Nitrifying Bacteria and Heterotrophs: Identification of a Micavibrio-Like Putative Predator of Nitrospira spp.

(2013) Jan Dolinšek et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing

(2013) D. Berry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Straightforward DOPE (Double Labeling of Oligonucleotide Probes)-FISH (FluorescenceIn SituHybridization) Method for Simultaneous Multicolor Detection of Six Microbial Populations

(2012) Faris Behnam et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

CLASI-FISH: Principles of combinatorial labeling and spectral imaging

(2012) Alex M. Valm et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Systems-level analysis of microbial community organization through combinatorial labeling and spectral imaging

(2011) A. M. Valm et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-Cell Ecophysiology of Microbes as Revealed by Raman Microspectroscopy or Secondary Ion Mass Spectrometry Imaging

(2009) Michael Wagner   Annual Review of Microbiology

Double Labeling of Oligonucleotide Probes for Fluorescence In Situ Hybridization (DOPE-FISH) Improves Signal Intensity and Increases rRNA Accessibility

(2009) K. Stoecker et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY