Measurements of DNA barcode label separations in nanochannels from time-series data

Topological events in single molecules of E. coli DNA confined in nanochannels

(2015) Jeffrey G. Reifenberger et al.   ANALYST

Distribution of distances between DNA barcode labels in nanochannels close to the persistence length

(2015) Wesley F. Reinhart et al.   JOURNAL OF CHEMICAL PHYSICS

Kirkwood Diffusivity of Long Semiflexible Chains in Nanochannel Confinement

(2015) Abhiram Muralidhar et al.   MACROMOLECULES

Metastable Knots in Confined Semiflexible Chains

(2015) Liang Dai et al.   MACROMOLECULES

Assembly and diploid architecture of an individual human genome via single-molecule technologies

(2015) Matthew Pendleton et al.   NATURE METHODS

Rapid detection of structural variation in a human genome using nanochannel-based genome mapping technology

(2015) Hongzhi Cao et al.   GigaScience

Finished sequence and assembly of the DUF1220-rich 1q21 region using a haploid human genome

(2014) Majesta O’Bleness et al.   BMC GENOMICS

Mixed confinement regimes during equilibrium confinement spectroscopy of DNA

(2014) Damini Gupta et al.   JOURNAL OF CHEMICAL PHYSICS

Dynamics and Conformation of Semiflexible Polymers in Strong Quasi-1D and -2D Confinement

(2014) Yeng-Long Chen et al.   MACROMOLECULES

Backfolding of Wormlike Chains Confined in Nanochannels

(2014) Abhiram Muralidhar et al.   MACROMOLECULES

Population Genomics Reveals Chromosome-Scale Heterogeneous Evolution in a Protoploid Yeast

(2014) Anne Friedrich et al.   MOLECULAR BIOLOGY AND EVOLUTION

Whole-genome sequencing identifies genomic heterogeneity at a nucleotide and chromosomal level in bladder cancer

(2014) Carl D. Morrison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Modeling the relaxation time of DNA confined in a nanochannel

(2013) Douglas R. Tree et al.   Biomicrofluidics

Beyond sequencing: optical mapping of DNA in the age of nanotechnology and nanoscopy

(2013) Michal Levy-Sakin et al.   CURRENT OPINION IN BIOTECHNOLOGY

Rapid Genome Mapping in Nanochannel Arrays for Highly Complete and Accurate De Novo Sequence Assembly of the Complex Aegilops tauschii Genome

(2013) Alex R. Hastie et al.   PLoS One

Fluctuation modes of nanoconfined DNA

(2012) Alena Karpusenko et al.   JOURNAL OF APPLIED PHYSICS

Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly

(2012) Ernest T Lam et al.   NATURE BIOTECHNOLOGY

Density fluctuations dispersion relationship for a polymer confined to a nanotube

(2011) Joshua H. Carpenter et al.   APPLIED PHYSICS LETTERS

A lab-on-chip for biothreat detection using single-molecule DNA mapping

(2011) Robert H. Meltzer et al.   LAB ON A CHIP

Transition between Two Regimes Describing Internal Fluctuation of DNA in a Nanochannel

(2011) Tianxiang Su et al.   PLoS One

High-resolution human genome structure by single-molecule analysis

(2010) B. Teague et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA fluorocode: A single molecule, optical map of DNA with nanometre resolution

(2010) Robert K. Neely et al.   Chemical Science

Mitigating Unwanted Photophysical Processes for Improved Single-Molecule Fluorescence Imaging

(2009) Richa Dave et al.   BIOPHYSICAL JOURNAL

Genome based cell population heterogeneity promotes tumorigenicity: The evolutionary mechanism of cancer

(2009) Christine J. Ye et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Scaling theory of DNA confined in nanochannels and nanoslits

(2008) Theo Odijk   PHYSICAL REVIEW E

An Oxygen Scavenging System for Improvement of Dye Stability in Single-Molecule Fluorescence Experiments

(2007) Colin Echeverría Aitken et al.   BIOPHYSICAL JOURNAL