Regulation of long non-coding RNAs and circular RNAs in spermatogonial stem cells

LncRNA Gm2044 highly expresses in spermatocyte and inhibits Utf1 translation by interacting with Utf1 mRNA

(2018) Ke Hu et al.   Genes & Genomics

Spermatogonial stem cells and spermatogenesis in mice, monkeys and men

(2018) Adetunji P. Fayomi et al.   Stem Cell Research

The Biogenesis, Functions, and Challenges of Circular RNAs

(2018) Xiang Li et al.   MOLECULAR CELL

An atlas of human long non-coding RNAs with accurate 5′ ends

(2017) Chung-Chau Hon et al.   NATURE

Circular RNAs: Identification, biogenesis and function

(2016) Karoline K. Ebbesen et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

LncRNA AK015322 promotes proliferation of spermatogonial stem cell C18-4 by acting as a decoy for microRNA-19b-3p

(2016) Ke Hu et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL

Expression dynamics, relationships, and transcriptional regulations of diverse transcripts in mouse spermatogenic cells

(2016) Xiwen Lin et al.   RNA Biology

A long non-coding RNA interacts with Gfra1 and maintains survival of mouse spermatogonial stem cells

(2016) L Li et al.   Cell Death & Disease

Circular RNA: A new star of noncoding RNAs

(2015) Shibin Qu et al.   CANCER LETTERS

The RNA Binding Protein Quaking Regulates Formation of circRNAs

(2015) Simon J. Conn et al.   CELL

A unique view on male infertility around the globe

(2015) Ashok Agarwal et al.   Reproductive Biology and Endocrinology

Downregulation of miR-320a/383-sponge-like long non-coding RNA NLC1-C (narcolepsy candidate-region 1 genes) is associated with male infertility and promotes testicular embryonal carcinoma cell proliferation

(2015) M Lü et al.   Cell Death & Disease

Nuclear Fractionation Reveals Thousands of Chromatin-Tethered Noncoding RNAs Adjacent to Active Genes

(2015) Michael S. Werner et al.   Cell Reports

The lncRNA DEANR1 Facilitates Human Endoderm Differentiation by Activating FOXA2 Expression

(2015) Wei Jiang et al.   Cell Reports

PARTICLE, a Triplex-Forming Long ncRNA, Regulates Locus-Specific Methylation in Response to Low-Dose Irradiation

(2015) Valerie Bríd O’Leary et al.   Cell Reports

The emerging landscape of small nucleolar RNAs in cell biology

(2015) Fabien Dupuis-Sandoval et al.   Wiley Interdisciplinary Reviews-RNA

Genome wide chromatin occupancy ofmrhlRNA and its role in gene regulation in mouse spermatogonial cells

(2015) Vijay Suresh Akhade et al.   RNA Biology

A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements

(2014) Hongseok Ha et al.   BMC GENOMICS

Non-coding RNAs: biological functions and applications

(2014) Baby Santosh et al.   CELL BIOCHEMISTRY AND FUNCTION

Retrotransposons and pseudogenes regulate mRNAs and lncRNAs via the piRNA pathway in the germline

(2014) Toshiaki Watanabe et al.   GENOME RESEARCH

PAX7 expression defines germline stem cells in the adult testis

(2014) Gina M. Aloisio et al.   JOURNAL OF CLINICAL INVESTIGATION

circRNA Biogenesis Competes with Pre-mRNA Splicing

(2014) Reut Ashwal-Fluss et al.   MOLECULAR CELL

The evolution of lncRNA repertoires and expression patterns in tetrapods

(2014) Anamaria Necsulea et al.   NATURE

Detecting and characterizing circular RNAs

(2014) William R Jeck et al.   NATURE BIOTECHNOLOGY

The roles and regulation of Sertoli cells in fate determinations of spermatogonial stem cells and spermatogenesis

(2014) Yanan Hai et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Evaluation of candidate spermatogonial markers ID4 and GPR125 in testes of adult human cadaveric organ donors

(2014) C. Sachs et al.   Andrology

Endogenous miRNA Sponge lincRNA-RoR Regulates Oct4, Nanog, and Sox2 in Human Embryonic Stem Cell Self-Renewal

(2013) Yue Wang et al.   DEVELOPMENTAL CELL

Long Noncoding RNAs: Past, Present, and Future

(2013) J. T. Y. Kung et al.   GENETICS

Circular Intronic Long Noncoding RNAs

(2013) Yang Zhang et al.   MOLECULAR CELL

DNMT1-interacting RNAs block gene-specific DNA methylation

(2013) Annalisa Di Ruscio et al.   NATURE

Natural RNA circles function as efficient microRNA sponges

(2013) Thomas B. Hansen et al.   NATURE

Circular RNAs are a large class of animal RNAs with regulatory potency

(2013) Sebastian Memczak et al.   NATURE

The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex

(2013) John R Prensner et al.   NATURE GENETICS

Functional Antagonism between Sall4 and Plzf Defines Germline Progenitors

(2012) Robin M. Hobbs et al.   Cell Stem Cell

Developmental Expression of the Pluripotency Factor Sal-Like Protein 4 in the Monkey, Human and Mouse Testis: Restriction to Premeiotic Germ Cells

(2012) K. Eildermann et al.   CELLS TISSUES ORGANS

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

(2012) T. Derrien et al.   GENOME RESEARCH

GENCODE: The reference human genome annotation for The ENCODE Project

(2012) J. Harrow et al.   GENOME RESEARCH

Fibroblast growth factor receptor 3 is highly expressed in rarely dividing human type A spermatogonia

(2012) Kathrein Kopylow et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Questions About Spermatogonia Posed and Answered Since 2000

(2012) D. G. de Rooij et al.   JOURNAL OF ANDROLOGY

mrhl RNA, a Long Noncoding RNA, Negatively Regulates Wnt Signaling through Its Protein Partner Ddx5/p68 in Mouse Spermatogonial Cells

(2012) G. Arun et al.   MOLECULAR AND CELLULAR BIOLOGY

The pluripotency factor LIN28 in monkey and human testes: a marker for spermatogonial stem cells?

(2012) N. Aeckerle et al.   MOLECULAR HUMAN REPRODUCTION

Circular RNAs are abundant, conserved, and associated with ALU repeats

(2012) W. R. Jeck et al.   RNA

Inhibitor of DNA Binding 4 Is Expressed Selectively by Single Spermatogonia in the Male Germline and Regulates the Self-Renewal of Spermatogonial Stem Cells in Mice1

(2011) Melissa J. Oatley et al.   BIOLOGY OF REPRODUCTION

Spermatogonial Stem Cell Self-Renewal Requires ETV5-Mediated Downstream Activation of Brachyury in Mice1

(2011) Xin Wu et al.   BIOLOGY OF REPRODUCTION

A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA

(2011) Marcella Cesana et al.   CELL

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

(2011) M. N. Cabili et al.   GENES & DEVELOPMENT

Identification and characterization of repopulating spermatogonial stem cells from the adult human testis

(2011) Fariborz Izadyar et al.   HUMAN REPRODUCTION

Wnt5a is a cell-extrinsic factor that supports self-renewal of mouse spermatogonial stem cells

(2011) J. R. Yeh et al.   JOURNAL OF CELL SCIENCE

Foxo1 is required in mouse spermatogonial stem cells for their maintenance and the initiation of spermatogenesis

(2011) Meredith J. Goertz et al.   JOURNAL OF CLINICAL INVESTIGATION

RETRACTED: The Noncoding RNA Mistral Activates Hoxa6 and Hoxa7 Expression and Stem Cell Differentiation by Recruiting MLL1 to Chromatin

(2011) Stéphane Bertani et al.   MOLECULAR CELL

lincRNAs act in the circuitry controlling pluripotency and differentiation

(2011) Mitchell Guttman et al.   NATURE

Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA

(2011) Dong Wang et al.   NATURE

Differential marker protein expression specifies rarefaction zone-containing human Adark spermatogonia

(2011) Kathrein von Kopylow et al.   REPRODUCTION

Pseudogenes: Pseudo-functional or key regulators in health and disease?

(2011) R. C. Pink et al.   RNA

A novel ncRNA gene from mouse chromosome 5 trans-splices with Dmrt1 on chromosome 19

(2010) Lei Zhang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The Mammalian Doublesex Homolog DMRT1 Is a Transcriptional Gatekeeper that Controls the Mitosis versus Meiosis Decision in Male Germ Cells

(2010) Clinton K. Matson et al.   DEVELOPMENTAL CELL

The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

(2010) Vidisha Tripathi et al.   MOLECULAR CELL

Genome-wide Identification of Polycomb-Associated RNAs by RIP-seq

(2010) Jing Zhao et al.   MOLECULAR CELL

Spermatogonial stem cell regulation and spermatogenesis

(2010) B. T. Phillips et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Isolation, Characterization, and Culture of Human Spermatogonia1

(2009) Zuping He et al.   BIOLOGY OF REPRODUCTION

The heterogeneity of spermatogonia is revealed by their topology and expression of marker proteins including the germ cell-specific proteins Nanos2 and Nanos3

(2009) Hitomi Suzuki et al.   DEVELOPMENTAL BIOLOGY

Androgen Receptor Roles in Spermatogenesis and Fertility: Lessons from Testicular Cell-Specific Androgen Receptor Knockout Mice

(2009) Ruey-Sheng Wang et al.   ENDOCRINE REVIEWS

Signaling molecules and pathways regulating the fate of spermatogonial stem cells

(2009) Zuping He et al.   MICROSCOPY RESEARCH AND TECHNIQUE

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

(2009) Mitchell Guttman et al.   NATURE

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

(2009) Ahmad M. Khalil et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation of Spermatogonial Stem Cell Self-Renewal in Mammals

(2008) Jon M. Oatley et al.   Annual Review of Cell and Developmental Biology

Long intronic noncoding RNA transcription: Expression noise or expression choice?

(2008) Rodrigo Louro et al.   GENOMICS

Kcnq1ot1 Antisense Noncoding RNA Mediates Lineage-Specific Transcriptional Silencing through Chromatin-Level Regulation

(2008) Radha Raman Pandey et al.   MOLECULAR CELL

Generation of pluripotent stem cells from adult human testis

(2008) Sabine Conrad et al.   NATURE

A Dual Origin of the Xist Gene from a Protein-Coding Gene and a Set of Transposable Elements

(2008) Eugeny A. Elisaphenko et al.   PLoS One

Expression of the pluripotency marker UTF1 is restricted to a subpopulation of early A spermatogonia in rat testis

(2008) Maaike P A van Bragt et al.   REPRODUCTION

The Antisense Transcriptomes of Human Cells

(2008) Yiping He et al.   SCIENCE

Polycomb Proteins Targeted by a Short Repeat RNA to the Mouse X Chromosome

(2008) J. Zhao et al.   SCIENCE

Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters

(2008) Leighton J. Core et al.   SCIENCE