Utilizing the fecal microbiota to understand foal gut transitions from birth to weaning

Dietary-induced modulation of the hindgut microbiota is related to behavioral responses during stressful events in horses

(2019) Alexandra Destrez et al.   PHYSIOLOGY & BEHAVIOR

Early colonisation and temporal dynamics of the gut microbial ecosystem in Standardbred foals

(2018) S. Quercia et al.   EQUINE VETERINARY JOURNAL

Effects of preservation method on canine (Canis lupus familiaris) fecal microbiota

(2018) Katti R. Horng et al.   PeerJ

Sample storage conditions induce post-collection biases in microbiome profiles

(2018) Samir V. Jenkins et al.   BMC MICROBIOLOGY

Microbiota and Derived Parameters in Fecal Samples of Infants with Non-IgE Cow’s Milk Protein Allergy under a Restricted Diet

(2018) María Díaz et al.   Nutrients

Interpersonal Variations in Gut Microbiota Profiles Supersedes the Effects of Differing Fecal Storage Conditions

(2018) Caspar Bundgaard-Nielsen et al.   Scientific Reports

Development of the gut microbiota in infancy and its impact on health in later life

(2017) Masaru Tanaka et al.   ALLERGOLOGY INTERNATIONAL

The Effects of Weaning Methods on Gut Microbiota Composition and Horse Physiology

(2017) Núria Mach et al.   Frontiers in Physiology

Increased Systolic and Diastolic Blood Pressure Is Associated With Altered Gut Microbiota Composition and Butyrate Production in Early PregnancyNovelty and Significance

(2016) Luisa F. Gomez-Arango et al.   HYPERTENSION

Common methods for fecal sample storage in field studies yield consistent signatures of individual identity in microbiome sequencing data

(2016) Ran Blekhman et al.   Scientific Reports

A Microbiological Map of the Healthy Equine Gastrointestinal Tract

(2016) Aaron C. Ericsson et al.   PLoS One

Th17 responses and natural IgM antibodies are related to gut microbiota composition in systemic lupus erythematosus patients

(2016) Patricia López et al.   Scientific Reports

342: Poor maternal nutrition is associated with alterations in the maternal and neonatal microbiome communities

(2015) Kathleen Antony et al.   AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY

Intestinal Microbiota Development in Preterm Neonates and Effect of Perinatal Antibiotics

(2015) Silvia Arboleya et al.   JOURNAL OF PEDIATRICS

The Infant Gut Microbiome: Evidence for Obesity Risk and Dietary Intervention

(2015) Petya Koleva et al.   Nutrients

Sample storage conditions significantly influence faecal microbiome profiles

(2015) Jocelyn M Choo et al.   Scientific Reports

Toward the identification of methanogenic archaeal groups as targets of methane mitigation in livestock animalsr

(2015) Benoit St-Pierre et al.   Frontiers in Microbiology

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Comparison of methods for fecal microbiome biospecimen collection

(2014) Christine Dominianni et al.   BMC MICROBIOLOGY

Microbiome of prebiotic-treated mice reveals novel targets involved in host response during obesity

(2014) Amandine Everard et al.   ISME Journal

Modulation of Fecal Clostridiales Bacteria and Butyrate by Probiotic Intervention with Lactobacillus paracasei DG Varies among Healthy Adults

(2014) Chiara Ferrario et al.   JOURNAL OF NUTRITION

A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes

(2014) Johan Larsbrink et al.   NATURE

Microbiome Data Distinguish Patients with Clostridium difficile Infection and Non-C. difficile-Associated Diarrhea from Healthy Controls

(2014) A. M. Schubert et al.   mBio

Molecular monitoring of the bacterial community structure in foal feces pre- and post-weaning

(2013) Céline Faubladier et al.   ANAEROBE

Infectious agents associated with diarrhoea in neonatal foals in central Kentucky: A comprehensive molecular study

(2013) N. M. Slovis et al.   EQUINE VETERINARY JOURNAL

Adiposity, Plasma Insulin, Leptin, Lipids, and Oxidative Stress in Mature Light Breed Horses

(2013) R.S. Pleasant et al.   JOURNAL OF VETERINARY INTERNAL MEDICINE

Effects of Administration of Live or Inactivated Virulent Rhodococccus equi and Age on the Fecal Microbiome of Neonatal Foals

(2013) Angela I. Bordin et al.   PLoS One

Investigating the Impact of Storage Conditions on Microbial Community Composition in Soil Samples

(2013) Benjamin E. R. Rubin et al.   PLoS One

Identification of a Core Bacterial Community within the Large Intestine of the Horse

(2013) Kirsty Dougal et al.   PLoS One

Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis

(2012) Samantha M Steelman et al.   BMC Veterinary Research

Feeding the foal for immediate and long-term health

(2012) I. BECVAROVA et al.   EQUINE VETERINARY JOURNAL

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Comparison of the Fecal Microbiota of Healthy Horses and Horses with Colitis by High Throughput Sequencing of the V3-V5 Region of the 16S rRNA Gene

(2012) Marcio C. Costa et al.   PLoS One

The equine intestinal microbiome

(2012) Marcio C. Costa et al.   ANIMAL HEALTH RESEARCH REVIEWS

Immunology and probiotic impact of the newborn and young children intestinal microflora

(2011) Eugenia Bezirtzoglou et al.   ANAEROBE

Changes in faecal bacteria and metabolic parameters in foals during the first six weeks of life

(2011) Juliane Kuhl et al.   VETERINARY MICROBIOLOGY

Colonization-Induced Host-Gut Microbial Metabolic Interaction

(2011) S. P. Claus et al.   mBio

Perspectives on Immunoglobulins in Colostrum and Milk

(2011) Walter L. Hurley et al.   Nutrients

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Enteritis associated with infection by Campylobacter jejuni in two Thoroughbred foals

(2010) A. S. Blunden et al.   EQUINE VETERINARY EDUCATION

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age

(2009) D Mariat et al.   BMC MICROBIOLOGY

High-Fat Diet Determines the Composition of the Murine Gut Microbiome Independently of Obesity

(2009) Marie A. Hildebrandt et al.   GASTROENTEROLOGY

The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice

(2009) P. J. Turnbaugh et al.   Science Translational Medicine

Use of quantitative real-time PCR for the detection of Salmonella spp. in fecal samples from horses at a veterinary teaching hospital

(2009) Nicola Pusterla et al.   VETERINARY JOURNAL

Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis

(2008) Harry J. Flint et al.   NATURE REVIEWS MICROBIOLOGY