Transcription Is Just the Beginning of Gene Expression Regulation: The Functional Significance of RNA-Binding Proteins to Post-transcriptional Processes in Plants

The nucleotides they are a-changin’: function of RNA binding proteins in post-transcriptional messenger RNA editing and modification in Arabidopsis

(2018) Marianne C Kramer et al.   CURRENT OPINION IN PLANT BIOLOGY

New insights into the plant epitranscriptome

(2018) Lee E Vandivier et al.   JOURNAL OF EXPERIMENTAL BOTANY

Sequence, Structure, and Context Preferences of Human RNA Binding Proteins

(2018) Daniel Dominguez et al.   MOLECULAR CELL

RNA-binding proteins in bacteria

(2018) Erik Holmqvist et al.   NATURE REVIEWS MICROBIOLOGY

An m6A-YTH Module Controls Developmental Timing and Morphogenesis in Arabidopsis

(2018) Laura Arribas-Hernández et al.   PLANT CELL

The m6A Reader ECT2 Controls Trichome Morphology by Affecting mRNA Stability in Arabidopsis

(2018) Lian-Huan Wei et al.   PLANT CELL

The YTH Domain Protein ECT2 Is an m6A Reader Required for Normal Trichome Branching in Arabidopsis

(2018) Jérémy Scutenaire et al.   PLANT CELL

Plant Glycine-Rich Proteins in Stress Response: An Emerging, Still Prospective Story

(2018) Magdalena Czolpinska et al.   Frontiers in Plant Science

POSTAR2: deciphering the post-transcriptional regulatory logics

(2018) Yumin Zhu et al.   NUCLEIC ACIDS RESEARCH

N6-Methyladenosine Inhibits Local Ribonucleolytic Cleavage to Stabilize mRNAs in Arabidopsis

(2018) Stephen J. Anderson et al.   Cell Reports

RNA Chaperone Function of a Universal Stress Protein in Arabidopsis Confers Enhanced Cold Stress Tolerance in Plants

(2017) Sarah Mae Boyles Melencion et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Protein Complexes Implicated in RNA Editing in Plant Organelles

(2017) Bernard Gutmann et al.   Molecular Plant

Quantitative analysis of protein interaction network dynamics in yeast

(2017) Albi Celaj et al.   Molecular Systems Biology

ALKBH10B Is an RNAN6-Methyladenosine Demethylase Affecting Arabidopsis Floral Transition

(2017) Hong-Chao Duan et al.   PLANT CELL

Arabidopsism6A demethylase activity modulates viral infection of a plant virus and the m6A abundance in its genomic RNAs

(2017) Mireya Martínez-Pérez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA Interactome

(2017) Tino Köster et al.   TRENDS IN PLANT SCIENCE

RNA structure, binding, and coordination in Arabidopsis

(2017) Shawn W. Foley et al.   Wiley Interdisciplinary Reviews-RNA

The Conservation and Function of RNA Secondary Structure in Plants

(2016) Lee E. Vandivier et al.   Annual Review of Plant Biology

SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes

(2016) Kristopher W. Brannan et al.   MOLECULAR CELL

Emerging Roles of RNA-Binding Proteins in Plant Growth, Development, and Stress Responses

(2016)   MOLECULES AND CELLS

RAID v2.0: an updated resource of RNA-associated interactions across organisms

(2016) Ying Yi et al.   NUCLEIC ACIDS RESEARCH

The RNA-binding protein repertoire of Arabidopsis thaliana

(2016) Claudius Marondedze et al.   Scientific Reports

Integrative genome-wide analysis reveals HLP1, a novel RNA-binding protein, regulates plant flowering by targeting alternative polyadenylation

(2015) Yong Zhang et al.   CELL RESEARCH

Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress

(2015) Sergei Filichkin et al.   CURRENT OPINION IN PLANT BIOLOGY

Expression of potato RNA-binding proteins StUBA2a/b and StUBA2c induces hypersensitive-like cell death and early leaf senescence in Arabidopsis

(2015) Jong-Kuk Na et al.   JOURNAL OF EXPERIMENTAL BOTANY

Global Analysis of the RNA-Protein Interaction and RNA Secondary Structure Landscapes of the Arabidopsis Nucleus

(2015) Sager J. Gosai et al.   MOLECULAR CELL

Plant vascular development: from early specification to differentiation

(2015) Bert De Rybel et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

A nuclear-encoded chloroplast-targeted S1 RNA-binding domain protein affects chloroplast rRNA processing and is crucial for the normal growth ofArabidopsis thaliana

(2015) Ji Hoon Han et al.   PLANT JOURNAL

Stress-responsive expression patterns and functional characterization of cold shock domain proteins in cabbage ( Brassica rapa ) under abiotic stress conditions

(2015) Min Ji Choi et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs

(2015) Benedikt M. Beckmann et al.   Nature Communications

Pentatricopeptide Repeat Proteins in Plants

(2014) Alice Barkan et al.   Annual Review of Plant Biology

Characterization of Phosphorylation- and RNA-Dependent UPF1 Interactors by Quantitative Proteomics

(2014) Valentin Flury et al.   JOURNAL OF PROTEOME RESEARCH

A census of human RNA-binding proteins

(2014) Stefanie Gerstberger et al.   NATURE REVIEWS GENETICS

Pervasive transcription: illuminating the dark matter of bacterial transcriptomes

(2014) Joseph T. Wade et al.   NATURE REVIEWS MICROBIOLOGY

A chloroplast-localized DEAD-box RNA helicaseAtRH3 is essential for intron splicing and plays an important role in the growth and stress response in Arabidopsis thaliana

(2014) Lili Gu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Molecular genetic framework for protophloem formation

(2014) A. Rodriguez-Villalon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selective mRNA sequestration by OLIGOURIDYLATE-BINDING PROTEIN 1 contributes to translational control during hypoxia inArabidopsis

(2014) Reed Sorenson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA Editing in Plants and Its Evolution

(2013) Mizuki Takenaka et al.   Annual Review of Genetics

catRAPID omics: a web server for large-scale prediction of protein-RNA interactions

(2013) F. Agostini et al.   BIOINFORMATICS

Dealing with Pervasive Transcription

(2013) Torben Heick Jensen et al.   MOLECULAR CELL

System-wide identification of RNA-binding proteins by interactome capture

(2013) Alfredo Castello et al.   Nature Protocols

Redox-dependent functional switching of plant proteins accompanying with their structural changes

(2013) Yong Hun Chi et al.   Frontiers in Plant Science

Effects of mutations in the Arabidopsis Cold Shock Domain Protein 3 (AtCSP3) gene on leaf cell expansion

(2012) Yongil Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

RiceRBP: A Resource for Experimentally Identified RNA Binding Proteins in Oryza sativa

(2012) Kelly A. Doroshenk et al.   Frontiers in Plant Science

S1 domain-containing STF modulates plastid transcription and chloroplast biogenesis in Nicotiana benthamiana

(2011) Young Jeon et al.   NEW PHYTOLOGIST

Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

(2011) Maria Kalyna et al.   NUCLEIC ACIDS RESEARCH

Spatial and Temporal Expression of Cold-responsive DEAD-box RNA Helicases Reveals their Functional Roles During Embryogenesis in Arabidopsis thaliana

(2011) Swamy K. Tripurani et al.   PLANT MOLECULAR BIOLOGY REPORTER

Eukaryotic cold shock domain proteins: highly versatile regulators of gene expression

(2010) Marija Mihailovich et al.   BIOESSAYS

Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii

(2010) Adam Labadorf et al.   BMC GENOMICS

RNA G-Quadruplexes in the model plant species Arabidopsis thaliana: prevalence and possible functional roles

(2010) Melissa A. Mullen et al.   NUCLEIC ACIDS RESEARCH

RBPDB: a database of RNA-binding specificities

(2010) K. B. Cook et al.   NUCLEIC ACIDS RESEARCH

TheArabidopsisU12-Type Spliceosomal Protein U11/U12-31K Is Involved in U12 Intron Splicing via RNA Chaperone Activity and Affects Plant Development

(2010) Won Yong Kim et al.   PLANT CELL

WD40 proteins propel cellular networks

(2010) Christian U. Stirnimann et al.   TRENDS IN BIOCHEMICAL SCIENCES

DEAD-box proteins as RNA helicases and chaperones

(2010) Inga Jarmoskaite et al.   Wiley Interdisciplinary Reviews-RNA

A proteomic analysis of oligo(dT)-bound mRNP containing oxidative stress-induced Arabidopsis thaliana RNA-binding proteins ATGRP7 and ATGRP8

(2009) Fabian Schmidt et al.   MOLECULAR BIOLOGY REPORTS

Targeted 3' Processing of Antisense Transcripts Triggers Arabidopsis FLC Chromatin Silencing

(2009) F. Liu et al.   SCIENCE

Role of plant RNA-binding proteins in development, stress response and genome organization

(2009) Zdravko J. Lorković   TRENDS IN PLANT SCIENCE

The SR protein family of splicing factors: master regulators of gene expression

(2008) Jennifer C. Long et al.   BIOCHEMICAL JOURNAL

RNA-binding proteins and post-transcriptional gene regulation

(2008) Tina Glisovic et al.   FEBS LETTERS

A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements

(2008) G. Mittler et al.   GENOME RESEARCH

G-Quadruplex DNA Assemblies: Loop Length, Cation Identity, and Multimer Formation†

(2008) Nicolas Smargiasso et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Integrated network analysis platform for protein-protein interactions

(2008) Jianmin Wu et al.   NATURE METHODS

Overexpression of wound-responsive RNA-binding proteins induces leaf senescence and hypersensitive-like cell death

(2008) Cha Young Kim et al.   NEW PHYTOLOGIST

Bacterial RNA Chaperones Confer Abiotic Stress Tolerance in Plants and Improved Grain Yield in Maize under Water-Limited Conditions

(2008) P. Castiglioni et al.   PLANT PHYSIOLOGY

Diverse RNA-Binding Proteins Interact with Functionally Related Sets of RNAs, Suggesting an Extensive Regulatory System

(2008) Daniel J Hogan et al.   PLOS BIOLOGY