Transcriptome analysis reveals candidate genes related to phosphorus starvation tolerance in sorghum

A gene regulatory network for root hair development

(2019) Michitaro Shibata et al.   JOURNAL OF PLANT RESEARCH

Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate

(2018) Jitender Giri et al.   Nature Communications

Emerging Pleiotropic Mechanisms Underlying Aluminum Resistance and Phosphorus Acquisition on Acidic Soils

(2018) Jurandir V. Magalhaes et al.   Frontiers in Plant Science

Maintenance of phosphate homeostasis and root development are coordinately regulated by MYB1, an R2R3-type MYB transcription factor in rice

(2017) Mian Gu et al.   JOURNAL OF EXPERIMENTAL BOTANY

DNA Topoisomerase 1 Prevents R-loop Accumulation to Modulate Auxin-Regulated Root Development in Rice

(2017) Sarfraz Shafiq et al.   Molecular Plant

ABNORMAL INFLORESCENCE MERISTEM1 Functions in Salicylic Acid Biosynthesis to Maintain Proper Reactive Oxygen Species Levels for Root Meristem Activity in Rice

(2017) Lei Xu et al.   PLANT CELL

Malate-dependent Fe accumulation is a critical checkpoint in the root developmental response to low phosphate

(2017) Javier Mora-Macías et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A genome-wide expression profile analysis reveals active genes and pathways coping with phosphate starvation in soybean

(2016) Qing Wang et al.   BMC GENOMICS

Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

(2016) Qingguo Du et al.   BMC PLANT BIOLOGY

Diversification of a Transcription Factor Family Led to the Evolution of Antagonistically Acting Genetic Regulators of Root Hair Growth

(2016) Holger Breuninger et al.   CURRENT BIOLOGY

TaZAT8, a C2H2-ZFP type transcription factor gene in wheat, plays critical roles in mediating tolerance to Pi deprivation through regulating P acquisition, ROS homeostasis and root system establishment

(2016) Weiwei Ding et al.   PHYSIOLOGIA PLANTARUM

Phosphate Deficiency Induces the Jasmonate Pathway and Enhances Resistance to Insect Herbivory

(2016) Ghazanfar Abbas Khan et al.   PLANT PHYSIOLOGY

The Molecular Mechanism of Ethylene-Mediated Root Hair Development Induced by Phosphate Starvation

(2016) Li Song et al.   PLoS Genetics

Iron-Dependent Callose Deposition Adjusts Root Meristem Maintenance to Phosphate Availability

(2015) Jens Müller et al.   DEVELOPMENTAL CELL

OsWRKY74, a WRKY transcription factor, modulates tolerance to phosphate starvation in rice

(2015) Xiaoyan Dai et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plant hormone cross-talk: the pivot of root growth

(2015) Elena Pacifici et al.   JOURNAL OF EXPERIMENTAL BOTANY

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

(2015) Anthony Mathelier et al.   NUCLEIC ACIDS RESEARCH

WRKY42 Modulates Phosphate Homeostasis through Regulating Phosphate Translocation and Acquisition in Arabidopsis

(2015) Tong Su et al.   PLANT PHYSIOLOGY

SHOEBOX Modulates Root Meristem Size in Rice through Dose-Dependent Effects of Gibberellins on Cell Elongation and Proliferation

(2015) Jintao Li et al.   PLoS Genetics

Phosphate Nutrition: Improving Low-Phosphate Tolerance in Crops

(2014) Damar Lizbeth López-Arredondo et al.   Annual Review of Plant Biology

Two in one sweep: aluminum tolerance and grain yield in P-limited soils are associated to the same genomic region in West African Sorghum

(2014) Willmar L Leiser et al.   BMC PLANT BIOLOGY

Field performance and nutritive value of sweet sorghum in eastern China

(2014) Hui Qu et al.   FIELD CROPS RESEARCH

HDG11 upregulates cell-wall-loosening protein genes to promote root elongation in Arabidopsis

(2014) Ping Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Duplicate and Conquer: Multiple Homologs of PHOSPHORUS-STARVATION TOLERANCE1 Enhance Phosphorus Acquisition and Sorghum Performance on Low-Phosphorus Soils

(2014) B. Hufnagel et al.   PLANT PHYSIOLOGY

Arabidopsis WRKY45 Transcription Factor Activates PHOSPHATE TRANSPORTER1;1 Expression in Response to Phosphate Starvation

(2014) H. Wang et al.   PLANT PHYSIOLOGY

Overexpression of OsMYB4P, an R2R3-type MYB transcriptional activator, increases phosphate acquisition in rice

(2014) Won Tae Yang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

MicroRNA-mediated surveillance of phosphate transporters on the move

(2014) Tzu-Yin Liu et al.   TRENDS IN PLANT SCIENCE

Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions

(2013) Michael Hackenberg et al.   BMC PLANT BIOLOGY

Carbon partitioning in tissues of a gain-of-function mutant (MYB75/PAP1-D) and a loss-of-function mutant (myb75-1) in Arabidopsis thaliana

(2013) Houman Fei et al.   Botany

WRKY6 Transcription Factor Restricts Arsenate Uptake and Transposon Activation in Arabidopsis

(2013) G. Castrillo et al.   PLANT CELL

Spatio-Temporal Transcript Profiling of Rice Roots and Shoots in Response to Phosphate Starvation and Recovery

(2013) D. Secco et al.   PLANT CELL

Organ-specific phosphorus-allocation patterns and transcript profiles linked to phosphorus efficiency in two contrasting wheat genotypes

(2013) TARIQ AZIZ et al.   PLANT CELL AND ENVIRONMENT

Carotenoid oxidation products as stress signals in plants

(2013) Michel Havaux   PLANT JOURNAL

Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids

(2013) Ryo Nakabayashi et al.   PLANT JOURNAL

The flavonoid biosynthetic pathway in Arabidopsis: Structural and genetic diversity

(2013) Kazuki Saito et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Recruitment and remodeling of an ancient gene regulatory network during land plant evolution

(2013) Nuno D. Pires et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ethylene and the responses of plants to phosphate deficiency

(2013) M. Roldan et al.   AoB Plants

Primary antioxidant free radical scavenging and redox signaling pathways in higher plant cells

(2012) Hong-Bo Shao et al.   International Journal of Biological Sciences

Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis

(2012) Jean-Marc Routaboul et al.   JOURNAL OF EXPERIMENTAL BOTANY

Phloem-MobileAux/IAATranscripts Target to the Root Tip and Modify Root ArchitectureF

(2012) Michitaka Notaguchi et al.   Journal of Integrative Plant Biology

Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

The emerging importance of the SPX domain-containing proteins in phosphate homeostasis

(2012) David Secco et al.   NEW PHYTOLOGIST

Strigolactones Are Involved in Root Response to Low Phosphate Conditions in Arabidopsis

(2012) E. Mayzlish-Gati et al.   PLANT PHYSIOLOGY

OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice

(2012) X. Dai et al.   PLANT PHYSIOLOGY

Phosphate sensing in root development

(2011) Steffen Abel   CURRENT OPINION IN PLANT BIOLOGY

OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa)

(2011) YanHua Qi et al.   NEW PHYTOLOGIST

Ethylene's Role in Phosphate Starvation Signaling: More than Just a Root Growth Regulator

(2011) V. K. Nagarajan et al.   PLANT AND CELL PHYSIOLOGY

Control of root hair development in Arabidopsis thaliana by an endoplasmic reticulum anchored member of the R2R3-MYB transcription factor family

(2011) Erin Slabaugh et al.   PLANT JOURNAL

The Arabidopsis Purple Acid Phosphatase AtPAP10 Is Predominantly Associated with the Root Surface and Plays an Important Role in Plant Tolerance to Phosphate Limitation

(2011) L. Wang et al.   PLANT PHYSIOLOGY

The Phosphate Transporter Gene OsPht1;8 Is Involved in Phosphate Homeostasis in Rice

(2011) H. Jia et al.   PLANT PHYSIOLOGY

Integration of low temperature and light signaling during cold acclimation response in Arabidopsis

(2011) R. Catala et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Root developmental adaptation to phosphate starvation: better safe than sorry

(2011) Benjamin Péret et al.   TRENDS IN PLANT SCIENCE

Genetic Regulation by NLA and MicroRNA827 for Maintaining Nitrate-Dependent Phosphate Homeostasis in Arabidopsis

(2011) Surya Kant et al.   PLoS Genetics

Redox Cycling in Iron Uptake, Efflux, and Trafficking

(2010) Daniel J. Kosman   JOURNAL OF BIOLOGICAL CHEMISTRY

Regulation of Phosphate Starvation Responses in Plants: Signaling Players and Cross-Talks

(2010) Hatem Rouached et al.   Molecular Plant

Callose Deposition: A Multifaceted Plant Defense Response

(2010) Estrella Luna et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

A basic helix-loop-helix transcription factor controls cell growth and size in root hairs

(2010) Keke Yi et al.   NATURE GENETICS

Source to sink: regulation of carotenoid biosynthesis in plants

(2010) Christopher I. Cazzonelli et al.   TRENDS IN PLANT SCIENCE

Phenylpropanoid Biosynthesis

(2009) Thomas Vogt   Molecular Plant

The WRKY6 Transcription Factor Modulates PHOSPHATE1 Expression in Response to Low Pi Stress in Arabidopsis

(2009) Y.-F. Chen et al.   PLANT CELL

Arabidopsis thaliana class-II TGA transcription factors are essential activators of jasmonic acid/ethylene-induced defense responses

(2009) Mark Zander et al.   PLANT JOURNAL

Gene expression profiles in rice roots under low phosphorus stress

(2009) Lihua Li et al.   PLANT MOLECULAR BIOLOGY

Transcript profiling of Zea mays roots reveals gene responses to phosphate deficiency at the plant- and species-specific levels

(2008) Carlos Calderon-Vazquez et al.   JOURNAL OF EXPERIMENTAL BOTANY

Signaling Components Involved in Plant Responses to Phosphate Starvation

(2008) Hui Yuan et al.   Journal of Integrative Plant Biology

Phosphate Starvation Responses and Gibberellic Acid Biosynthesis are Regulated by the MYB62 Transcription Factor in Arabidopsis

(2008) Ballachanda N. Devaiah et al.   Molecular Plant

Tomato strigolactones are derived from carotenoids and their biosynthesis is promoted by phosphate starvation

(2008) Juan Antonio López-Ráez et al.   NEW PHYTOLOGIST

Involvement ofOsSPX1in phosphate homeostasis in rice

(2008) Chuang Wang et al.   PLANT JOURNAL

Plant hormones and nutrient signaling

(2008) Vicente Rubio et al.   PLANT MOLECULAR BIOLOGY

The Effect of Iron on the Primary Root Elongation of Arabidopsis during Phosphate Deficiency

(2008) J. T. Ward et al.   PLANT PHYSIOLOGY