PRECISE: a domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors

Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets

(2018) Ricard Argelaguet et al.   Molecular Systems Biology

Genetic and transcriptional evolution alters cancer cell line drug response

(2018) Uri Ben-David et al.   NATURE

Found In Translation: a machine learning model for mouse-to-human inference

(2018) Rachelly Normand et al.   NATURE METHODS

Molecular characterization of breast and lung tumors by integration of multiple data types with functional sparse-factor analysis

(2018) Tycho Bismeijer et al.   PLoS Computational Biology

Integration of Tumor Genomic Data with Cell Lines Using Multi-dimensional Network Modules Improves Cancer Pharmacogenomics

(2018) James T. Webber et al.   Cell Systems

Discovering novel pharmacogenomic biomarkers by imputing drug response in cancer patients from large genomics studies

(2017) Paul Geeleher et al.   GENOME RESEARCH

Patient-derived xenografts undergo mouse-specific tumor evolution

(2017) Uri Ben-David et al.   NATURE GENETICS

TumorFusions: an integrative resource for cancer-associated transcript fusions

(2017) Xin Hu et al.   NUCLEIC ACIDS RESEARCH

A Landscape of Pharmacogenomic Interactions in Cancer

(2016) Francesco Iorio et al.   CELL

High-throughput screening using patient-derived tumor xenografts to predict clinical trial drug response

(2015) Hui Gao et al.   NATURE MEDICINE

Clinical drug response can be predicted using baseline gene expression levels and in vitro drug sensitivity in cell lines

(2014) Paul Geeleher et al.   GENOME BIOLOGY

The Clinical Relevance of Cancer Cell Lines

(2013) J.-P. Gillet et al.   JNCI-Journal of the National Cancer Institute

Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal

(2013) J. Gao et al.   Science Signaling

Domain Transfer Multiple Kernel Learning

(2011) Lixin Duan et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Domain Adaptation via Transfer Component Analysis

(2010) Sinno Jialin Pan et al.   IEEE TRANSACTIONS ON NEURAL NETWORKS

A Survey on Transfer Learning

(2009) Sinno Jialin Pan et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING