Extended regions of suspected mis-assembly in the rat reference genome

The Birth and Death of Olfactory Receptor Gene Families in Mammalian Niche Adaptation

(2018) Graham M Hughes et al.   MOLECULAR BIOLOGY AND EVOLUTION

Heterogeneous stock rats: a model to study the genetics of despair-like behavior in adolescence

(2017) K. Holl et al.   GENES BRAIN AND BEHAVIOR

Genetic Fine-Mapping and Identification of Candidate Genes and Variants for Adiposity Traits in Outbred Rats

(2017) Gregory R. Keele et al.   Obesity

Genomic landscape of rat strain and substrain variation

(2015) Roel Hermsen et al.   BMC GENOMICS

Genomes and phenomes of a population of outbred rats and its progenitors

(2014) Amelie Baud et al.   Scientific Data

Fine-mapping diabetes-related traits, including insulin resistance, in heterogeneous stock rats

(2012) Leah C. Solberg Woods et al.   PHYSIOLOGICAL GENOMICS

The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance

(2010) S. S. Atanur et al.   GENOME RESEARCH

Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads

(2010) G. Lunter et al.   GENOME RESEARCH

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Fine-mapping a locus for glucose tolerance using heterogeneous stock rats

(2010) Leah C. Solberg Woods et al.   PHYSIOLOGICAL GENOMICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Rats!

(2009) P. M. Iannaccone et al.   Disease Models & Mechanisms

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Distribution and functional impact of DNA copy number variation in the rat

(2008) Victor Guryev et al.   NATURE GENETICS

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH