Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm

RepeatsDB-lite: a web server for unit annotation of tandem repeat proteins

(2018) Layla Hirsh et al.   NUCLEIC ACIDS RESEARCH

Automated evaluation of quaternary structures from protein crystals

(2018) Spencer Bliven et al.   PLoS Computational Biology

Identification of repetitive units in protein structures with ReUPred

(2016) Layla Hirsh et al.   AMINO ACIDS

RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures

(2016) Lisanna Paladin et al.   NUCLEIC ACIDS RESEARCH

Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts

(2015) Guido Capitani et al.   BIOINFORMATICS

TAPO: A combined method for the identification of tandem repeats in protein structures

(2015) Phuong Do Viet et al.   FEBS LETTERS

The near-symmetry of proteins

(2015) Maayan Bonjack-Shterengartz et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Structural and evolutionary versatility in protein complexes with uneven stoichiometry

(2015) Joseph A. Marsh et al.   Nature Communications

Detection of circular permutations within protein structures using CE-CP

(2014) S. E. Bliven et al.   BIOINFORMATICS

ConSole: using modularity of Contact maps to locate Solenoid domains in protein structures

(2014) Thomas Hrabe et al.   BMC BIOINFORMATICS

Systematic Detection of Internal Symmetry in Proteins Using CE-Symm

(2014) Douglas Myers-Turnbull et al.   JOURNAL OF MOLECULAR BIOLOGY

ECOD: An Evolutionary Classification of Protein Domains

(2014) Hua Cheng et al.   PLoS Computational Biology

Detecting Repetitions and Periodicities in Proteins by Tiling the Structural Space

(2013) R. Gonzalo Parra et al.   JOURNAL OF PHYSICAL CHEMISTRY B

SCOPe: Structural Classification of Proteins—extended, integrating SCOP and ASTRAL data and classification of new structures

(2013) Naomi K. Fox et al.   NUCLEIC ACIDS RESEARCH

RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures

(2012) Ian Walsh et al.   BIOINFORMATICS

BioJava: an open-source framework for bioinformatics in 2012

(2012) A. Prlic et al.   BIOINFORMATICS

Tandem repeats in proteins: From sequence to structure

(2011) Andrey V. Kajava   JOURNAL OF STRUCTURAL BIOLOGY

Modular Evolution and the Origins of Symmetry: Reconstruction of a Three-Fold Symmetric Globular Protein

(2011) Aron Broom et al.   STRUCTURE

Detecting internally symmetric protein structures

(2010) Changhoon Kim et al.   BMC BIOINFORMATICS

Experimental support for the evolution of symmetric protein architecture from a simple peptide motif

(2010) J. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The βγ-Crystallin Superfamily Contains a Universal Motif for Binding Calcium,

(2009) Penmatsa Aravind et al.   BIOCHEMISTRY

REPETITA: detection and discrimination of the periodicity of protein solenoid repeats by discrete Fourier transform

(2009) L. Marsella et al.   BIOINFORMATICS

Symmetric Structures in the Universe of Protein Folds

(2009) Aysam Guerler et al.   Journal of Chemical Information and Modeling

Alternative to Homo-oligomerisation: The Creation of Local Symmetry in Proteins by Internal Amplification

(2009) Anne-Laure Abraham et al.   JOURNAL OF MOLECULAR BIOLOGY

Analysis of proteins with the 'Hot dog' fold: Prediction of function and identification of catalytic residues of hypothetical proteins

(2009) Lakshmi S Pidugu et al.   BMC STRUCTURAL BIOLOGY

Swelfe: a detector of internal repeats in sequences and structures

(2008) Anne-Laure Abraham et al.   BIOINFORMATICS