Phylogeny, ancestors, and anagenesis in the hominin fossil record

The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes

(2018) Tanja Stadler et al.   JOURNAL OF THEORETICAL BIOLOGY

Bayesian selection of misspecified models is overconfident and may cause spurious posterior probabilities for phylogenetic trees

(2018) Ziheng Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bias in phylogenetic measurements of extinction and a case study of end-Permian tetrapods

(2017) Laura C. Soul et al.   PALAEONTOLOGY

Preservation of uropygial gland lipids in a 48-million-year-old bird

(2017) Shane O'Reilly et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bayesian and likelihood phylogenetic reconstructions of morphological traits are not discordant when taking uncertainty into consideration: a comment on Puttick et   al .

(2017) Joseph W. Brown et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The evolutionary relationships and age of Homo naledi: An assessment using dated Bayesian phylogenetic methods

(2016) Mana Dembo et al.   JOURNAL OF HUMAN EVOLUTION

Comparing cal3 and other a posteriori time-scaling approaches in a case study with the pterocephaliid trilobites

(2016) David W. Bapst et al.   PALEOBIOLOGY

Estimating Bayesian Phylogenetic Information Content

(2016) Paul O. Lewis et al.   SYSTEMATIC BIOLOGY

Does Gene Tree Discordance Explain the Mismatch between Macroevolutionary Models and Empirical Patterns of Tree Shape and Branching Times?

(2016) Tanja Stadler et al.   SYSTEMATIC BIOLOGY

Bayesian analysis of a morphological supermatrix sheds light on controversial fossil hominin relationships

(2015) Mana Dembo et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Homo heidelbergensis

(2014) Laura T. Buck et al.   CURRENT BIOLOGY

Bayesian Analysis Using a Simple Likelihood Model Outperforms Parsimony for Estimation of Phylogeny from Discrete Morphological Data

(2014) April M. Wright et al.   PLoS One

The fossilized birth-death process for coherent calibration of divergence-time estimates

(2014) T. A. Heath et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bioinformatics Curriculum Guidelines: Toward a Definition of Core Competencies

(2014) Lonnie Welch et al.   PLoS Computational Biology

Identifying anagenesis and cladogenesis in the fossil record

(2013) T. Aze et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assessing the role of cladogenesis in macroevolution by integrating fossil and molecular evidence

(2013) L. C. Strotz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dental Morphology and the Phylogenetic "Place" of Australopithecus sediba

(2013) J. D. Irish et al.   SCIENCE

A stochastic rate-calibrated method for time-scaling phylogenies of fossil taxa

(2013) David W. Bapst   Methods in Ecology and Evolution

A phylogeny of Cenozoic macroperforate planktonic foraminifera from fossil data

(2011) Tracy Aze et al.   BIOLOGICAL REVIEWS

Divergence Time Estimation Using Fossils as Terminal Taxa and the Origins of Lissamphibia

(2011) R. Alexander Pyron   SYSTEMATIC BIOLOGY

Sampling-through-time in birth–death trees

(2010) Tanja Stadler   JOURNAL OF THEORETICAL BIOLOGY

Is Homo heidelbergensis a distinct species? New insight on the Mauer mandible

(2009) Aurélien Mounier et al.   JOURNAL OF HUMAN EVOLUTION

Stratocladistics: Integrating Temporal Data and Character Data in Phylogenetic Inference

(2008) Daniel C. Fisher   Annual Review of Ecology Evolution and Systematics