High efficiency error suppression for accurate detection of low-frequency variants
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
High efficiency error suppression for accurate detection of low-frequency variants
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
Publisher
Oxford University Press (OUP)
Online
2019-05-17
DOI
10.1093/nar/gkz474
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Detection of Low-Frequency Mutations and Identification of Heat-Induced Artifactual Mutations Using Duplex Sequencing
- (2019) Eun Ahn et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Early stage NSCLC — challenges to implementing ctDNA-based screening and MRD detection
- (2018) Christopher Abbosh et al. Nature Reviews Clinical Oncology
- Detecting Rare Mutations and DNA Damage with Sequencing-Based Methods
- (2018) Daniel B. Sloan et al. TRENDS IN BIOTECHNOLOGY
- Prediction of acute myeloid leukaemia risk in healthy individuals
- (2018) Sagi Abelson et al. NATURE
- Cell-free DNA as a post-treatment surveillance strategy: current status
- (2017) Justin M. Burgener et al. SEMINARS IN ONCOLOGY
- Ultrasensitive and high-efficiency screen of de novo low-frequency mutations by o2n-seq
- (2017) Kaile Wang et al. Nature Communications
- Circulating tumour DNA sequence analysis as an alternative to multiple myeloma bone marrow aspirates
- (2017) Olena Kis et al. Nature Communications
- Targeted error-suppressed quantification of circulating tumor DNA using semi-degenerate barcoded adapters and biotinylated baits
- (2017) Miguel Alcaide et al. Scientific Reports
- Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data
- (2016) Melanie Schirmer et al. BMC BIOINFORMATICS
- Integrated digital error suppression for improved detection of circulating tumor DNA
- (2016) Aaron M Newman et al. NATURE BIOTECHNOLOGY
- Sequencing small genomic targets with high efficiency and extreme accuracy
- (2015) Michael W Schmitt et al. NATURE METHODS
- Library preparation methods for next-generation sequencing: Tone down the bias
- (2014) Erwin L. van Dijk et al. EXPERIMENTAL CELL RESEARCH
- An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage
- (2014) Aaron M Newman et al. NATURE MEDICINE
- Detecting ultralow-frequency mutations by Duplex Sequencing
- (2014) Scott R Kennedy et al. Nature Protocols
- Molecular indexing enables quantitative targeted RNA sequencing and reveals poor efficiencies in standard library preparations
- (2014) Glenn K. Fu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation
- (2013) Maura Costello et al. NUCLEIC ACIDS RESEARCH
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- Detection of ultra-rare mutations by next-generation sequencing
- (2012) M. W. Schmitt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Detection and quantification of rare mutations with massively parallel sequencing
- (2011) I. Kinde et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries
- (2011) Daniel Aird et al. GENOME BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started