Field crop phenomics: enabling breeding for radiation use efficiency and biomass in cereal crops

3D plant model assessed by terrestrial LiDAR and hemispherical photographs: A useful tool for comparing light interception among oil palm progenies

(2018) Raphaël P.A. Perez et al.   AGRICULTURAL AND FOREST METEOROLOGY

Measuring the dynamic photosynthome

(2018) Erik H Murchie et al.   ANNALS OF BOTANY

A practical method using a network of fixed infrared sensors for estimating crop canopy conductance and evaporation rate

(2018) Hamlyn G. Jones et al.   BIOSYSTEMS ENGINEERING

Estimation of plant height using a high throughput phenotyping platform based on unmanned aerial vehicle and self-calibration: Example for sorghum breeding

(2018) Pengcheng Hu et al.   EUROPEAN JOURNAL OF AGRONOMY

Leveraging biological insight and environmental variation to improve phenotypic prediction: Integrating crop growth models (CGM) with whole genome prediction (WGP)

(2018) C.D. Messina et al.   EUROPEAN JOURNAL OF AGRONOMY

Genetic gains in NSW wheat cultivars from 1901 to 2014 as revealed from synchronous flowering during the optimum period

(2018) B.M. Flohr et al.   EUROPEAN JOURNAL OF AGRONOMY

Improved nitrogen retrievals with airborne-derived fluorescence and plant traits quantified from VNIR-SWIR hyperspectral imagery in the context of precision agriculture

(2018) Carlos Camino et al.   International Journal of Applied Earth Observation and Geoinformation

Indirect selection for potential yield in early-generation, spaced plantings of wheat and other small-grain cereals: a review

(2018) R. A. Fischer et al.   Crop & Pasture Science

Quantitative Remote Sensing at Ultra-High Resolution with UAV Spectroscopy: A Review of Sensor Technology, Measurement Procedures, and Data Correction Workflows

(2018) Helge Aasen et al.   Remote Sensing

Deep Learning: Individual Maize Segmentation From Terrestrial Lidar Data Using Faster R-CNN and Regional Growth Algorithms

(2018) Shichao Jin et al.   Frontiers in Plant Science

High Throughput Determination of Plant Height, Ground Cover, and Above-Ground Biomass in Wheat with LiDAR

(2018) Jose A. Jimenez-Berni et al.   Frontiers in Plant Science

Towards Remote Estimation of Radiation Use Efficiency in Maize Using UAV-Based Low-Cost Camera Imagery

(2018) Andreas Tewes et al.   Agronomy-Basel

An imputation platform to enhance integration of rice genetic resources

(2018) Diane R. Wang et al.   Nature Communications

Elucidating Sorghum Biomass, Nitrogen and Chlorophyll Contents With Spectral and Morphological Traits Derived From Unmanned Aircraft System

(2018) Jiating Li et al.   Frontiers in Plant Science

Assessment of growth, leaf N concentration and chlorophyll content of sweet sorghum using canopy reflectance

(2017) Shardendu Kumar Singh et al.   FIELD CROPS RESEARCH

The ETH field phenotyping platform FIP: a cable-suspended multi-sensor system

(2017) Norbert Kirchgessner et al.   FUNCTIONAL PLANT BIOLOGY

Field Scanalyzer: An automated robotic field phenotyping platform for detailed crop monitoring

(2017) Nicolas Virlet et al.   FUNCTIONAL PLANT BIOLOGY

Improving Orthorectification of UAV-Based Push-Broom Scanner Imagery Using Derived Orthophotos From Frame Cameras

(2017) Ayman Habib et al.   IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing

Illumination compensation in ground based hyperspectral imaging

(2017) Alexander Wendel et al.   ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING

Spatio-temporal evaluation of plant height in corn via unmanned aerial systems

(2017) Sebastian Varela et al.   Journal of Applied Remote Sensing

Hyperspectral reflectance as a tool to measure biochemical and physiological traits in wheat

(2017) Viridiana Silva-Perez et al.   JOURNAL OF EXPERIMENTAL BOTANY

Efficient in-field plant phenomics for row-crops with an autonomous ground vehicle

(2017) James Underwood et al.   Journal of Field Robotics

Machine Learning Techniques for Predicting Crop Photosynthetic Capacity from Leaf Reflectance Spectra

(2017) David Heckmann et al.   Molecular Plant

Biochemical model of C3 photosynthesis applied to wheat at different temperatures

(2017) Viridiana Silva-Pérez et al.   PLANT CELL AND ENVIRONMENT

Predicting grain yield using canopy hyperspectral reflectance in wheat breeding data

(2017) Osval A. Montesinos-López et al.   Plant Methods

A High-Throughput, Field-Based Phenotyping Technology for Tall Biomass Crops

(2017) Maria G. Salas Fernandez et al.   PLANT PHYSIOLOGY

Opinion: Smart farming is key to developing sustainable agriculture

(2017) Achim Walter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimation of photosynthesis traits from leaf reflectance spectra: Correlation to nitrogen content as the dominant mechanism

(2017) Benjamin Dechant et al.   REMOTE SENSING OF ENVIRONMENT

Extrinsic Parameter Calibration for Line Scanning Cameras on Ground Vehicles with Navigation Systems Using a Calibration Pattern

(2017) Alexander Wendel et al.   SENSORS

Contribution of Crop Models to Adaptation in Wheat

(2017) Karine Chenu et al.   TRENDS IN PLANT SCIENCE

Genomic Selection in Plant Breeding: Methods, Models, and Perspectives

(2017) José Crossa et al.   TRENDS IN PLANT SCIENCE

Yield, growth, canopy traits and photosynthesis in high-yielding, synthetic hexaploid-derived wheats cultivars compared with non-synthetic wheats

(2017) Yonglu Tang et al.   Crop & Pasture Science

Estimation of Winter Wheat Above-Ground Biomass Using Unmanned Aerial Vehicle-Based Snapshot Hyperspectral Sensor and Crop Height Improved Models

(2017) Jibo Yue et al.   Remote Sensing

Unmanned Aerial Vehicle Remote Sensing for Field-Based Crop Phenotyping: Current Status and Perspectives

(2017) Guijun Yang et al.   Frontiers in Plant Science

QTLs and Potential Candidate Genes for Heat Stress Tolerance Identified from the Mapping Populations Specifically Segregating for Fv/Fm in Wheat

(2017) Dew Kumari Sharma et al.   Frontiers in Plant Science

Multi-Spectral Imaging from an Unmanned Aerial Vehicle Enables the Assessment of Seasonal Leaf Area Dynamics of Sorghum Breeding Lines

(2017) Andries B. Potgieter et al.   Frontiers in Plant Science

High-Throughput Phenotyping of Plant Height: Comparing Unmanned Aerial Vehicles and Ground LiDAR Estimates

(2017) Simon Madec et al.   Frontiers in Plant Science

Discrimination of CRISPR/Cas9-induced mutants of rice seeds using near-infrared hyperspectral imaging

(2017) Xuping Feng et al.   Scientific Reports

Yield trends under varying environmental conditions for sorghum and wheat across Australia

(2016) Andries B. Potgieter et al.   AGRICULTURAL AND FOREST METEOROLOGY

Physiological breeding

(2016) Matthew Reynolds et al.   CURRENT OPINION IN PLANT BIOLOGY

The sequence of sequencers: The history of sequencing DNA

(2016) James M. Heather et al.   GENOMICS

High-throughput phenotyping technologies allow accurate selection of stay-green

(2016) Greg J. Rebetzke et al.   JOURNAL OF EXPERIMENTAL BOTANY

Photosynthetic contribution of the ear to grain filling in wheat: a comparison of different methodologies for evaluation

(2016) Rut Sanchez-Bragado et al.   JOURNAL OF EXPERIMENTAL BOTANY

Stay-green traits to improve wheat adaptation in well-watered and water-limited environments

(2016) John T. Christopher et al.   JOURNAL OF EXPERIMENTAL BOTANY

Measures for interoperability of phenotypic data: minimum information requirements and formatting

(2016) Hanna Ćwiek-Kupczyńska et al.   Plant Methods

Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach

(2016) Jorge Gago et al.   PLANT PHYSIOLOGY

High-Throughput Phenotyping of Maize Leaf Physiological and Biochemical Traits Using Hyperspectral Reflectance

(2016) Craig R. Yendrek et al.   PLANT PHYSIOLOGY

Field phenotyping of water stress at tree scale by UAV-sensed imagery: new insights for thermal acquisition and calibration

(2016) David Gómez-Candón et al.   PRECISION AGRICULTURE

Seasonal variability of multiple leaf traits captured by leaf spectroscopy at two temperate deciduous forests

(2016) Xi Yang et al.   REMOTE SENSING OF ENVIRONMENT

Modelling and genetic dissection of staygreen under heat stress

(2016) R. Suzuky Pinto et al.   THEORETICAL AND APPLIED GENETICS

Machine Learning for High-Throughput Stress Phenotyping in Plants

(2016) Arti Singh et al.   TRENDS IN PLANT SCIENCE

Canopy Temperature and Vegetation Indices from High-Throughput Phenotyping Improve Accuracy of Pedigree and Genomic Selection for Grain Yield in Wheat

(2016) Jessica Rutkoski et al.   G3-Genes Genomes Genetics

Methodology for High-Throughput Field Phenotyping of Canopy Temperature Using Airborne Thermography

(2016) David M. Deery et al.   Frontiers in Plant Science

MultispeQ Beta: a tool for large-scale plant phenotyping connected to the open PhotosynQ network

(2016) Sebastian Kuhlgert et al.   Royal Society Open Science

The CRISPR/Cas9 system for plant genome editing and beyond

(2015) Luisa Bortesi et al.   BIOTECHNOLOGY ADVANCES

Stomatal Conductance Is Essential for Higher Yield Potential of C3Crops

(2015) Dominique Roche   CRITICAL REVIEWS IN PLANT SCIENCES

Physiological Factors Underpinning Grain Yield Improvements of Synthetic-Derived Wheat in Southwestern China

(2015) Yonglu Tang et al.   CROP SCIENCE

The Physiological Basis of the Genetic Progress in Yield Potential of CIMMYT Spring Wheat Cultivars from 1966 to 2009

(2015) K. A. B. Aisawi et al.   CROP SCIENCE

Genomic tools to assist breeding for drought tolerance

(2015) Peter Langridge et al.   CURRENT OPINION IN BIOTECHNOLOGY

Imaging spectroscopy algorithms for mapping canopy foliar chemical and morphological traits and their uncertainties

(2015) Aditya Singh et al.   ECOLOGICAL APPLICATIONS

Combining UAV-based plant height from crop surface models, visible, and near infrared vegetation indices for biomass monitoring in barley

(2015) Juliane Bendig et al.   International Journal of Applied Earth Observation and Geoinformation

Generating 3D hyperspectral information with lightweight UAV snapshot cameras for vegetation monitoring: From camera calibration to quality assurance

(2015) Helge Aasen et al.   ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING

Sugarcane for water-limited environments. Variation in stomatal conductance and its genetic correlation with crop productivity

(2015) J. Basnayake et al.   JOURNAL OF EXPERIMENTAL BOTANY

Hyperspectral Indices, Correlation and Regression Models for Estimating Growth Parameters of Wheat Genotypes

(2015) Ramanjit Kaur et al.   Journal of the Indian Society of Remote Sensing

SensorDB: a virtual laboratory for the integration, visualization and analysis of varied biological sensor data

(2015) Ali Salehi et al.   Plant Methods

Plant phenotyping: from bean weighing to image analysis

(2015) Achim Walter et al.   Plant Methods

Using High-Resolution Hyperspectral and Thermal Airborne Imagery to Assess Physiological Condition in the Context of Wheat Phenotyping

(2015) Victoria Gonzalez-Dugo et al.   Remote Sensing

Fusion of Plant Height and Vegetation Indices for the Estimation of Barley Biomass

(2015) Nora Tilly et al.   Remote Sensing

APSIM – Evolution towards a new generation of agricultural systems simulation

(2014) Dean P. Holzworth et al.   ENVIRONMENTAL MODELLING & SOFTWARE

LiDAR based biomass and crop nitrogen estimates for rapid, non-destructive assessment of wheat nitrogen status

(2014) Jan U.H. Eitel et al.   FIELD CROPS RESEARCH

Breeding drought-tolerant maize hybrids for the US corn-belt: discovery to product

(2014) Mark Cooper et al.   JOURNAL OF EXPERIMENTAL BOTANY

Pheno-Copter: A Low-Altitude, Autonomous Remote-Sensing Robotic Helicopter for High-Throughput Field-Based Phenotyping

(2014) Scott Chapman et al.   Agronomy-Basel

Proximal Remote Sensing Buggies and Potential Applications for Field-Based Phenotyping

(2014) David Deery et al.   Agronomy-Basel

The Next-Generation Sequencing Revolution and Its Impact on Genomics

(2013) Daniel C. Koboldt et al.   CELL

Hyperspectral canopy sensing of paddy rice aboveground biomass at different growth stages

(2013) Martin L. Gnyp et al.   FIELD CROPS RESEARCH

Chlorophyll fluorescence analysis: a guide to good practice and understanding some new applications

(2013) E.H. Murchie et al.   JOURNAL OF EXPERIMENTAL BOTANY

Using leaf optical properties to detect ozone effects on foliar biochemistry

(2013) Elizabeth A. Ainsworth et al.   PHOTOSYNTHESIS RESEARCH

BreedVision — A Multi-Sensor Platform for Non-Destructive Field-Based Phenotyping in Plant Breeding

(2013) Lucas Busemeyer et al.   SENSORS

Whole-genome sequencing reveals untapped genetic potential in Africa’s indigenous cereal crop sorghum

(2013) Emma S. Mace et al.   Nature Communications

Photosynthetic traits in Australian wheat varieties released between 1958 and 2007

(2012) V.O. Sadras et al.   FIELD CROPS RESEARCH

Genomic regions for canopy temperature and their genetic association with stomatal conductance and grain yield in wheat

(2012) Greg J. Rebetzke et al.   FUNCTIONAL PLANT BIOLOGY

Evolution of C4 plants: a new hypothesis for an interaction of CO2 and water relations mediated by plant hydraulics

(2012) C. P. Osborne et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The temporal and species dynamics of photosynthetic acclimation in flag leaves of rice (Oryza sativa) and wheat (Triticum aestivum) under elevated carbon dioxide

(2012) Chunwu Zhu et al.   PHYSIOLOGIA PLANTARUM

Potential of field hyperspectral imaging as a non destructive method to assess leaf nitrogen content in Wheat

(2011) Nathalie Vigneau et al.   FIELD CROPS RESEARCH

Leaf optical properties reflect variation in photosynthetic metabolism and its sensitivity to temperature

(2011) Shawn P. Serbin et al.   JOURNAL OF EXPERIMENTAL BOTANY

Evaluation of two crop canopy sensors for nitrogen variability determination in irrigated maize

(2011) T. M. Shaver et al.   PRECISION AGRICULTURE

Characterizing forest canopy structure with lidar composite metrics and machine learning

(2011) Kaiguang Zhao et al.   REMOTE SENSING OF ENVIRONMENT

Fluorescence, temperature and narrow-band indices acquired from a UAV platform for water stress detection using a micro-hyperspectral imager and a thermal camera

(2011) P.J. Zarco-Tejada et al.   REMOTE SENSING OF ENVIRONMENT

Ground-Based Optical Measurements at European Flux Sites: A Review of Methods, Instruments and Current Controversies

(2011) Manuela Balzarolo et al.   SENSORS

Genetic gain in yield and associated changes in phenotype, trait plasticity and competitive ability of South Australian wheat varieties released between 1958 and 2007

(2011) Victor O. Sadras et al.   Crop & Pasture Science

Partitioning of assimilates to deeper roots is associated with cooler canopies and increased yield under drought in wheat

(2010) Marta S. Lopes et al.   FUNCTIONAL PLANT BIOLOGY

Breeding for improved water productivity in temperate cereals: phenotyping, quantitative trait loci, markers and the selection environment

(2010) Richard A. Richards et al.   FUNCTIONAL PLANT BIOLOGY

Non-destructive estimation of wheat leaf chlorophyll content from hyperspectral measurements through analytical model inversion

(2010) E. J. Botha et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Raising yield potential of wheat. II. Increasing photosynthetic capacity and efficiency

(2010) M. A. J. Parry et al.   JOURNAL OF EXPERIMENTAL BOTANY

Adapting APSIM to model the physiology and genetics of complex adaptive traits in field crops

(2010) Graeme L. Hammer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Raising yield potential of wheat. III. Optimizing partitioning to grain while maintaining lodging resistance

(2010) M. J. Foulkes et al.   JOURNAL OF EXPERIMENTAL BOTANY

Thermal and Narrowband Multispectral Remote Sensing for Vegetation Monitoring From an Unmanned Aerial Vehicle

(2009) J. Berni et al.   IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING

Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy

(2009) JAN HANNEMANN et al.   PLANT CELL AND ENVIRONMENT

Remote sensing of solar-induced chlorophyll fluorescence: Review of methods and applications

(2009) M. Meroni et al.   REMOTE SENSING OF ENVIRONMENT

Mapping canopy conductance and CWSI in olive orchards using high resolution thermal remote sensing imagery

(2009) J.A.J. Berni et al.   REMOTE SENSING OF ENVIRONMENT

Progress in ideotype breeding to increase rice yield potential

(2008) Shaobing Peng et al.   FIELD CROPS RESEARCH