The trihelix family of transcription factors: functional and evolutionary analysis in Moso bamboo (Phyllostachys edulis)

Genome-wide analysis of VQ motif-containing proteins in Moso bamboo (Phyllostachys edulis)

(2017) Yujiao Wang et al.   PLANTA

Transcriptome-wide identification and expression analysis of chrysanthemum SBP-like transcription factors

(2016) Aiping Song et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Genome-wide identification and expression analysis of the IQD gene family in moso bamboo (Phyllostachys edulis)

(2016) Min Wu et al.   Scientific Reports

Comprehensive analysis of trihelix genes and their expression under biotic and abiotic stresses in Populus trichocarpa

(2016) Zhanchao Wang et al.   Scientific Reports

MYB Transcription Factors in Chinese Pear (Pyrus bretschneideri Rehd.): Genome-Wide Identification, Classification, and Expression Profiling during Fruit Development

(2016) Yunpeng Cao et al.   Frontiers in Plant Science

Genome-wide identification and expression profiling analysis of trihelix gene family in tomato

(2015) Chuying Yu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The genome wide analysis of GT transcription factors that respond to drought and waterlogging stresses in maize

(2015) Hewei Du et al.   EUPHYTICA

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Genome-wide survey and expression analysis of the amino acid transporter gene family in poplar

(2015) Min Wu et al.   Tree Genetics & Genomes

Genome-Wide Analysis of the AP2/ERF Transcription Factors Family and the Expression Patterns of DREB Genes in Moso Bamboo (Phyllostachys edulis)

(2015) Huili Wu et al.   PLoS One

Root architecture and root and tuber crop productivity

(2014) Arthur Q. Villordon et al.   TRENDS IN PLANT SCIENCE

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)

(2013) Zhenhua Peng et al.   NATURE GENETICS

PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors

(2013) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Selection of Reference Genes for Quantitative Real-Time PCR in Bamboo (Phyllostachys edulis)

(2013) Chunjie Fan et al.   PLoS One

Comprehensive Analysis of NAC Domain Transcription Factor Gene Family in Populus trichocarpa

(2012) Ruibo Hu et al.   BMC PLANT BIOLOGY

Identification and in silico characterization of soybean trihelix-GT and bHLH transcription factors involved in stress responses

(2012) Marina Borges Osorio et al.   GENETICS AND MOLECULAR BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Poplar GTL1 Is a Ca2+/Calmodulin-Binding Transcription Factor that Functions in Plant Water Use Efficiency and Drought Tolerance

(2012) Hua Weng et al.   PLoS One

The trihelix family of transcription factors – light, stress and development

(2012) Ruth N. Kaplan-Levy et al.   TRENDS IN PLANT SCIENCE

AP2/ERF family transcription factors in plant abiotic stress responses

(2011) Junya Mizoi et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Analyses of the oligopeptide transporter gene family in poplar and grape

(2011) Jun Cao et al.   BMC GENOMICS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

SMART 7: recent updates to the protein domain annotation resource

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

MicroRNAs Regulate the Timing of Embryo Maturation in Arabidopsis

(2011) M. R. Willmann et al.   PLANT PHYSIOLOGY

Plant-specific trihelix transcription factor AtGT2L interacts with calcium/calmodulin and responds to cold and salt stresses

(2011) Jing Xi et al.   PLANT SCIENCE

High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)

(2011) Yun-Jie Zhang et al.   PLoS One

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

TheArabidopsisGTL1 Transcription Factor Regulates Water Use Efficiency and Drought Tolerance by Modulating Stomatal Density via Transrepression ofSDD1

(2010) Chan Yul Yoo et al.   PLANT CELL

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Divergence in function and expression of the NOD26-like intrinsic proteins in plants

(2009) Qingpo Liu et al.   BMC GENOMICS

Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses

(2009) Yujie Fang et al.   MOLECULAR GENETICS AND GENOMICS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Repression of Seed Maturation Genes by a Trihelix Transcriptional Repressor in Arabidopsis Seedlings

(2009) M.-J. Gao et al.   PLANT CELL

Soybean Trihelix Transcription Factors GmGT-2A and GmGT-2B Improve Plant Tolerance to Abiotic Stresses in Transgenic Arabidopsis

(2009) Zong-Ming Xie et al.   PLoS One

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols