DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning
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Title
DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning
Authors
Keywords
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Journal
BIOINFORMATICS
Volume -, Issue -, Pages -
Publisher
Oxford University Press (OUP)
Online
2019-04-12
DOI
10.1093/bioinformatics/btz276
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- (2019) Qian Liu et al. BMC GENOMICS
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- Nanopore sequencing meets epigenetics
- (2017) Michael C Schatz NATURE METHODS
- Detecting DNA cytosine methylation using nanopore sequencing
- (2017) Jared T Simpson et al. NATURE METHODS
- Mapping DNA methylation with high-throughput nanopore sequencing
- (2017) Arthur C Rand et al. NATURE METHODS
- Centromere evolution and CpG methylation during vertebrate speciation
- (2017) Kazuki Ichikawa et al. Nature Communications
- RNAN6-methyladenosine methylation in post-transcriptional gene expression regulation
- (2015) Yanan Yue et al. GENES & DEVELOPMENT
- Function and information content of DNA methylation
- (2015) Dirk Schübeler NATURE
- Entering the era of bacterial epigenomics with single molecule real time DNA sequencing
- (2013) Brigid M Davis et al. CURRENT OPINION IN MICROBIOLOGY
- DNA methylation: roles in mammalian development
- (2013) Zachary D. Smith et al. NATURE REVIEWS GENETICS
- DNA methylation dynamics in health and disease
- (2013) Yehudit Bergman et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Detection and mapping of 5-methylcytosine and 5-hydroxymethylcytosine with nanopore MspA
- (2013) A. H. Laszlo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Error rates for nanopore discrimination among cytosine, methylcytosine, and hydroxymethylcytosine along individual DNA strands
- (2013) J. Schreiber et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
- (2011) Felix Krueger et al. BIOINFORMATICS
- Epigenetic alterations in aging
- (2010) Susana Gonzalo JOURNAL OF APPLIED PHYSIOLOGY
- Direct detection of DNA methylation during single-molecule, real-time sequencing
- (2010) Benjamin A Flusberg et al. NATURE METHODS
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