Identification of copper (Cu) stress-responsive grapevine microRNAs and their target genes by high-throughput sequencing

Identification of novel and salt-responsive miRNAs to explore miRNA-mediated regulatory network of salt stress response in radish (Raphanus sativus L.)

(2015) Xiaochuan Sun et al.   BMC GENOMICS

Genome-Wide Mapping and Analysis of Grapevine MicroRNAs and Their Potential Target Genes

(2015) Songtao Jiu et al.   Plant Genome

Identification of cold-inducible microRNAs in grapevine

(2015) Xiaoming Sun et al.   Frontiers in Plant Science

Identification of fruit related microRNAs in cucumber (Cucumis sativusL.) using high-throughput sequencing technology

(2015) Xueling Ye et al.   HEREDITAS

Copper stress induces the differential expression of microRNAs in non-heading Chinese cabbage

(2014) J. Ren et al.   BIOLOGIA PLANTARUM

Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis

(2014) Jianxia Jiang et al.   BMC GENOMICS

MicroRNA–target gene responses to lead-induced stress in cotton (Gossypium hirsutum L.)

(2014) Qiuling He et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Identification of Radish (Raphanus sativus L.) miRNAs and Their Target Genes to Explore miRNA-Mediated Regulatory Networks in Lead (Pb) Stress Responses by High-Throughput Sequencing and Degradome Analysis

(2014) Yan Wang et al.   PLANT MOLECULAR BIOLOGY REPORTER

Genome-wide identification of soybean microRNAs and their targets reveals their organ-specificity and responses to phosphate starvation

(2013) Feng Xu et al.   BMC GENOMICS

Genome-wide analysis of the AP2/ERF transcription factor superfamily in Chinese cabbage (Brassica rapa ssp. pekinensis)

(2013) Xiaoming Song et al.   BMC GENOMICS

Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis

(2013) Peng Shuai et al.   BMC GENOMICS

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Identification of microRNAs in Caragana intermedia by high-throughput sequencing and expression analysis of 12 microRNAs and their targets under salt stress

(2013) Jianfeng Zhu et al.   PLANT CELL REPORTS

Transcriptome-wide analysis of dynamic variations in regulation modes of grapevine microRNAs on their target genes during grapevine development

(2013) Chen Wang et al.   PLANT MOLECULAR BIOLOGY

Calcium-mediated enhancement of copper tolerance in Elodea canadensis

(2012) H. L. Min et al.   BIOLOGIA PLANTARUM

The effect of water deficit and excess copper on proline metabolism in Nicotiana benthamiana

(2012) H. -M. Ku et al.   BIOLOGIA PLANTARUM

Identification of microRNAs from Amur grape (vitis amurensis Rupr.) by deep sequencing and analysis of microRNA variations with bioinformatics

(2012) Chen Wang et al.   BMC GENOMICS

Identification of wild soybean miRNAs and their target genes responsive to aluminum stress

(2012) Qiao-Ying Zeng et al.   BMC PLANT BIOLOGY

Expression profile of miRNAs in Populus cathayana L. and Salix matsudana Koidz under salt stress

(2012) Jing Zhou et al.   MOLECULAR BIOLOGY REPORTS

Characterization of grapevine microR164 and its target genes

(2012) Xin Sun et al.   MOLECULAR BIOLOGY REPORTS

Genome-wide identification and analysis of microRNA responding to long-term waterlogging in crown roots of maize seedlings

(2012) Lihong Zhai et al.   PHYSIOLOGIA PLANTARUM

Transcriptional Regulation of Arabidopsis MIR168a and ARGONAUTE1 Homeostasis in Abscisic Acid and Abiotic Stress Responses

(2012) W. Li et al.   PLANT PHYSIOLOGY

Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica

(2011) Bosheng Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Conservation and Diversity of MicroRNA-associated Copper-regulatory Networks in Populus trichocarpaF

(2011) Shanfa Lu et al.   Journal of Integrative Plant Biology

Arabidopsis Argonaute 2 Regulates Innate Immunity via miRNA393∗-Mediated Silencing of a Golgi-Localized SNARE Gene, MEMB12

(2011) Xiaoming Zhang et al.   MOLECULAR CELL

Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase

(2011) Chen Wang et al.   PHYSIOLOGIA PLANTARUM

Characterization of microRNAs Identified in a Table Grapevine Cultivar with Validation of Computationally Predicted Grapevine miRNAs by miR-RACE

(2011) Chen Wang et al.   PLoS One

Role of Small RNAs in Host-Microbe Interactions

(2010) Surekha Katiyar-Agarwal et al.   Annual Review of Phytopathology

Correction: High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera

(2010) Erica Mica et al.   BMC GENOMICS

Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata)

(2010) Changnian Song et al.   BMC GENOMICS

Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)

(2010) Chuan-Zhi Zhao et al.   BMC PLANT BIOLOGY

miRNA expression patterns of Triticum dicoccoides in response to shock drought stress

(2010) Melda Kantar et al.   PLANTA

The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis

(2009) Gang Wu et al.   CELL

Origins and Mechanisms of miRNAs and siRNAs

(2009) Richard W. Carthew et al.   CELL

High throughput sequencing technology reveals that the taxoid elicitor methyl jasmonate regulates microRNA expression in Chinese yew (Taxus chinensis)

(2009) Deyou Qiu et al.   GENE

Conserved miRNA analysis in Gossypium hirsutum through small RNA sequencing

(2009) Meng-Bin Ruan et al.   GENOMICS

SQUAMOSA Promoter Binding Protein-Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis

(2009) H. Yamasaki et al.   PLANT CELL

Cloning and characterization of small non-coding RNAs from grape

(2009) Andrea Carra et al.   PLANT JOURNAL

Identification and characterization of 27 conserved microRNAs in citrus

(2009) Changnian Song et al.   PLANTA

Complex regulation of the TIR1/AFB family of auxin receptors

(2009) G. Parry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families

(2008) Gyorgy Szittya et al.   BMC GENOMICS

Identification of novel and candidate miRNAs in rice by high throughput sequencing

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa

(2008) R. D. Morin et al.   GENOME RESEARCH

Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

(2008) S. Moxon et al.   GENOME RESEARCH

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Heavy metal-regulated new microRNAs from rice

(2008) Si Qi Huang et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL