Selection of Optimal Ancestry Informative Markers for Classification and Ancestry Proportion Estimation in Pigs

Evidence of evolutionary history and selective sweeps in the genome of Meishan pig reveals its genetic and phenotypic characterization

(2018) Pengju Zhao et al.   GigaScience

Widespread introgression in Chinese indigenous chicken breeds from commercial broiler

(2018) Chunyuan Zhang et al.   Evolutionary Applications

Unravelling the genetic loci for growth and carcass traits in Chinese Bamaxiang pigs based on a 1.4 million SNP array

(2018) Huanfa Gong et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Signatures of Selection and Interspecies Introgression in the Genome of Chinese Domestic Pigs

(2017) Yaling Zhu et al.   Genome Biology and Evolution

A panel of 74 AISNPs: Improved ancestry inference within Eastern Asia

(2016) Cai-Xia Li et al.   Forensic Science International-Genetics

Distinguishing contemporary hybridization from past introgression with postgenomic ancestry-informative SNPs in strongly differentiated Ciona species

(2016) Sarah Bouchemousse et al.   MOLECULAR ECOLOGY

Admixture mapping identifies introgressed genomic regions in North American canids

(2016) Bridgett M. vonHoldt et al.   MOLECULAR ECOLOGY

Multi-InDel Analysis for Ancestry Inference of Sub-Populations in China

(2016) Kuan Sun et al.   Scientific Reports

A minimum set of ancestry informative markers for determining admixture proportions in a mixed American population: the Brazilian set

(2015) Hadassa C Santos et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Selection of highly informative SNP markers for population affiliation of major US populations

(2015) Xiangpei Zeng et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

The chimerical genome of Isla del Coco feral pigs (Costa Rica), an isolated population since 1793 but with remarkable levels of diversity

(2015) E. Bianco et al.   MOLECULAR ECOLOGY

Selection of discriminant SNP markers for breed and geographic assignment of Italian sheep

(2015) C. Dimauro et al.   SMALL RUMINANT RESEARCH

Hybrid origin of European commercial pigs examined by an in-depth haplotype analysis on chromosome 1

(2015) Mirte Bosse et al.   Frontiers in Genetics

Evaluating the accuracy of AIM panels at quantifying genome ancestry

(2014) Jacobo Pardo-Seco et al.   BMC GENOMICS

Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression

(2014) Mirte Bosse et al.   Nature Communications

Machine learning patterns for neuroimaging-genetic studies in the cloud

(2014) Benoit Da Mota et al.   Frontiers in Neuroinformatics

RFMix: A Discriminative Modeling Approach for Rapid and Robust Local-Ancestry Inference

(2013) Brian K. Maples et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A panel of ancestry informative markers to estimate and correct potential effects of population stratification in Han Chinese

(2013) Pengfei Qin et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Assessment of coyote-wolf-dog admixture using ancestry-informative diagnostic SNPs

(2013) J. Monzón et al.   MOLECULAR ECOLOGY

Genetic Diversity, Linkage Disequilibrium and Selection Signatures in Chinese and Western Pigs Revealed by Genome-Wide SNP Markers

(2013) Huashui Ai et al.   PLoS One

A Panel of Ancestry Informative Markers for the Complex Five-Way Admixed South African Coloured Population

(2013) Michelle Daya et al.   PLoS One

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus

(2013) Laurent AF Frantz et al.   GENOME BIOLOGY

Sparse Principal Component Analysis for Identifying Ancestry-Informative Markers in Genome-Wide Association Studies

(2012) Seokho Lee et al.   GENETIC EPIDEMIOLOGY

Uncontrolled admixture and loss of genetic diversity in a local Vietnamese pig breed

(2012) Cécile Berthouly-Salazar et al.   Ecology and Evolution

Development of a Panel of Genome-Wide Ancestry Informative Markers to Study Admixture Throughout the Americas

(2012) Joshua Mark Galanter et al.   PLoS Genetics

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

Comparison of measures of marker informativeness for ancestry and admixture mapping

(2011) Lili Ding et al.   BMC GENOMICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

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(2009) Chao Tian et al.   MOLECULAR MEDICINE

A PCA-based method for ancestral informative markers selection in structured populations

(2009) Feng Zhang et al.   Science in China. Series C, Life sciences / Chinese Academy of Sciences

A probabilistic multi-class strategy of one-vs.-rest support vector machines for cancer classification

(2008) Jin-Hyuk Hong et al.   NEUROCOMPUTING