Microbial hexuronate catabolism in biotechnology

Novel Metabolic Pathways and Regulons for Hexuronate Utilization in Proteobacteria

(2018) Jason T. Bouvier et al.   JOURNAL OF BACTERIOLOGY

Engineering Saccharomyces cerevisiae for co-utilization of d-galacturonic acid and d-glucose from citrus peel waste

(2018) Ryan J. Protzko et al.   Nature Communications

NADPH-dependent 5-keto-D-gluconate reductase is a part of the fungal pathway for D-glucuronate catabolism

(2017) Joosu Kuivanen et al.   FEBS LETTERS

The pathway intermediate 2-keto-3-deoxy-L-galactonate mediates the induction of genes involved in D-galacturonic acid utilization in Aspergillus niger

(2017) Ebru Alazi et al.   FEBS LETTERS

Scaling up and scaling down the production of galactaric acid from pectin using Trichoderma reesei

(2017) Toni Paasikallio et al.   Microbial Cell Factories

A cascading biorefinery process targeting sulfated polysaccharides (ulvan) from Ulva ohnoi

(2017) Christopher R.K. Glasson et al.   Algal Research-Biomass Biofuels and Bioproducts

Clustered Genes Encoding 2-Keto-l-Gulonate Reductase and l-Idonate 5-Dehydrogenase in the Novel Fungal d-Glucuronic Acid Pathway

(2017) Joosu Kuivanen et al.   Frontiers in Microbiology

The transcriptional activator GaaR ofAspergillus nigeris required for release and utilization ofd-galacturonic acid from pectin

(2016) Ebru Alazi et al.   FEBS LETTERS

An Evolutionarily Conserved Transcriptional Activator-Repressor Module Controls Expression of Genes for D-Galacturonic Acid Utilization in Aspergillus niger

(2016) Jing Niu et al.   GENETICS

Fermentative production of l-galactonate by using recombinant Saccharomyces cerevisiae containing the endogenous galacturonate reductase gene from Cryptococcus diffluens

(2016) Takeo Matsubara et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Engineering Aspergillus niger for galactaric acid production: elimination of galactaric acid catabolism by using RNA sequencing and CRISPR/Cas9

(2016) Joosu Kuivanen et al.   Microbial Cell Factories

The introduction of the fungal d-galacturonate pathway enables the consumption of d-galacturonic acid by Saccharomyces cerevisiae

(2016) Alessandra Biz et al.   Microbial Cell Factories

A novel Zn2Cys6transcription factor BcGaaR regulates D-galacturonic acid utilization inBotrytis cinerea

(2016) Lisha Zhang et al.   MOLECULAR MICROBIOLOGY

Engineering nonphosphorylative metabolism to generate lignocellulose-derived products

(2016) Yi-Shu Tai et al.   Nature Chemical Biology

KdgF, the missing link in the microbial metabolism of uronate sugars from pectin and alginate

(2016) Joanne K. Hobbs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Evolutionarily Conserved Transcriptional Activator-Repressor Module Controls Expression of Genes for D-Galacturonic Acid Utilization in Aspergillus niger

(2016) Jing Niu et al.   GENETICS

A novel pathway for fungal D-glucuronate catabolism contains an L-idonate forming 2-keto-L-gulonate reductase

(2016) Joosu Kuivanen et al.   Scientific Reports

Highly Efficient Chemical Process To Convert Mucic Acid into Adipic Acid and DFT Studies of the Mechanism of the Rhenium-Catalyzed Deoxydehydration

(2014) Xiukai Li et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Escherichia coli kduD encodes an oxidoreductase that converts both sugar and steroid substrates

(2014) Agne Tubeleviciute et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Galactaro δ-Lactone Isomerase: Lactone Isomerization by a Member of the Amidohydrolase Superfamily

(2014) Jason T. Bouvier et al.   BIOCHEMISTRY

Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes

(2014) J Benz et al.   Biotechnology for Biofuels

Categorisation of sugar acid dehydratases in Aspergillus niger

(2014) Francine A. Motter et al.   FUNGAL GENETICS AND BIOLOGY

Conversion of orange peel to L-galactonic acid in a consolidated process using engineered strains of Aspergillus niger

(2014) Joosu Kuivanen et al.   AMB Express

Physiological and molecular aspects of degradation of plant polysaccharides by fungi: What have we learned fromAspergillus?

(2013) Helena Culleton et al.   Biotechnology Journal

Genome-wide analysis of pectate-induced gene expression in Botrytis cinerea : Identification and functional analysis of putative d -galacturonate transporters

(2013) Lisha Zhang et al.   FUNGAL GENETICS AND BIOLOGY

Efficient ethanol production from brown macroalgae sugars by a synthetic yeast platform

(2013) Maria Enquist-Newman et al.   NATURE

Novel Insights into E. coli’s Hexuronate Metabolism: KduI Facilitates the Conversion of Galacturonate and Glucuronate under Osmotic Stress Conditions

(2013) Monique Rothe et al.   PLoS One

Engineering Filamentous Fungi for Conversion of d-Galacturonic Acid to l-Galactonic Acid

(2012) Joosu Kuivanen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pectin-rich biomass as feedstock for fuel ethanol production

(2012) Meredith C. Edwards et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Tagaturonate-fructuronate epimerase UxaE, a novel enzyme in the hexuronate catabolic network inThermotoga maritima

(2012) Irina A. Rodionova et al.   ENVIRONMENTAL MICROBIOLOGY

Evidence for rapid uptake ofd-galacturonic acid in the yeastSaccharomyces cerevisiaeby a channel-type transport system

(2012) Ben Souffriau et al.   FEBS LETTERS

Characterization of a novelAgrobacterium tumefaciensGalactarolactone Cycloisomerase Enzyme for Direct Conversion of d-Galactarolactone to 3-Deoxy-2-keto-l-threo-hexarate

(2012) Martina Andberg et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Toward pectin fermentation by Saccharomyces cerevisiae: Expression of the first two steps of a bacterial pathway for d-galacturonate metabolism

(2012) Eline H. Huisjes et al.   JOURNAL OF BIOTECHNOLOGY

The d-galacturonic acid catabolic pathway in Botrytis cinerea

(2011) Lisha Zhang et al.   FUNGAL GENETICS AND BIOLOGY

Crystal Structure of Uronate Dehydrogenase fromAgrobacterium tumefaciens

(2011) Tarja Parkkinen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Bioconversion of D-galacturonate to keto-deoxy-L-galactonate (3-deoxy-L-threo-hex-2-ulosonate) using filamentous fungi

(2010) Marilyn G Wiebe et al.   BMC BIOTECHNOLOGY

Metabolic Engineering of Fungal Strains for Conversion of D-Galacturonate to meso-Galactarate

(2009) D. Mojzita et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification in Agrobacterium tumefaciens of the d-galacturonic acid dehydrogenase gene

(2009) Harry Boer et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

d-Galacturonic acid catabolism in microorganisms and its biotechnological relevance

(2009) Peter Richard et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Assessment of the pectin degrading enzyme network of Aspergillus niger by functional genomics

(2009) Elena S. Martens-Uzunova et al.   FUNGAL GENETICS AND BIOLOGY

Production of Glucaric Acid from a Synthetic Pathway in Recombinant Escherichia coli

(2008) T. S. Moon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pectin structure and biosynthesis

(2008) D MOHNEN   CURRENT OPINION IN PLANT BIOLOGY

An evolutionary conserved d-galacturonic acid metabolic pathway operates across filamentous fungi capable of pectin degradation

(2008) Elena S. Martens-Uzunova et al.   FUNGAL GENETICS AND BIOLOGY

New Insights into the Alternative d-Glucarate Degradation Pathway

(2008) Asadollah Aghaie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY