Identification of Nitrogen-Fixing Bradyrhizobium Associated With Roots of Field-Grown Sorghum by Metagenome and Proteome Analyses
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Title
Identification of Nitrogen-Fixing Bradyrhizobium Associated With Roots of Field-Grown Sorghum by Metagenome and Proteome Analyses
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2019-03-12
DOI
10.3389/fmicb.2019.00407
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Note: Only part of the references are listed.- A genetically and functionally diverse group of non-diazotrophic Bradyrhizobium spp. colonizes the root endophytic compartment of Arabidopsis thaliana
- (2018) Martinus Schneijderberg et al. BMC PLANT BIOLOGY
- Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria
- (2018) Ling Xu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota
- (2018) Allen Van Deynze et al. PLOS BIOLOGY
- Nitrogen Fixation in Cereals
- (2018) Mónica Rosenblueth et al. Frontiers in Microbiology
- Specificity in Legume-Rhizobia Symbioses
- (2017) Mitchell Andrews et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Drought and host selection influence bacterial community dynamics in the grass root microbiome
- (2017) Dan Naylor et al. ISME Journal
- Effect of Flooding and the nosZ Gene in Bradyrhizobia on Bradyrhizobial Community Structure in the Soil
- (2017) Yuichi Saeki et al. MICROBES AND ENVIRONMENTS
- Anaerobic Reduction of Nitrate to Nitrous Oxide Is Lower in Bradyrhizobium japonicum than in Bradyrhizobium diazoefficiens
- (2017) Arthur Fernandes Siqueira et al. MICROBES AND ENVIRONMENTS
- Exploration of bacterial N2-fixation systems in association with soil-grown sugarcane, sweet potato, and paddy rice: a review and synthesis
- (2017) Tadakatsu Yoneyama et al. SOIL SCIENCE AND PLANT NUTRITION
- Temperature-Dependent Expression of NodC and Community Structure of Soybean-Nodulating Bradyrhizobia
- (2016) Sokichi Shiro et al. MICROBES AND ENVIRONMENTS
- Identification of the Hydrogen Uptake Gene Cluster for Chemolithoautotrophic Growth and Symbiosis Hydrogen Uptake in Bradyrhizobium Diazoefficiens
- (2016) Sachiko Masuda et al. MICROBES AND ENVIRONMENTS
- Are Symbiotic Methanotrophs Key Microbes for N Acquisition in Paddy Rice Root?
- (2016) Kiwamu Minamisawa et al. MICROBES AND ENVIRONMENTS
- Origin and Evolution of Nitrogen Fixation Genes on Symbiosis Islands and Plasmid in Bradyrhizobium
- (2016) Takashi Okubo et al. MICROBES AND ENVIRONMENTS
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Novel European free-living, non-diazotrophic Bradyrhizobium isolates from contrasting soils that lack nodulation and nitrogen fixation genes – a genome comparison
- (2016) Frances Patricia Jones et al. Scientific Reports
- Preferential Association of Endophytic Bradyrhizobia with Different Rice Cultivars and Its Implications for Rice Endophyte Evolution
- (2015) Pongdet Piromyou et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Rhizobium–legume symbiosis in the absence of Nod factors: two possible scenarios with or without the T3SS
- (2015) Shin Okazaki et al. ISME Journal
- Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils
- (2015) David VanInsberghe et al. ISME Journal
- The Type III Secretion System (T3SS) is a Determinant for Rice-Endophyte Colonization by Non-Photosynthetic Bradyrhizobium
- (2015) Pongdet Piromyou et al. MICROBES AND ENVIRONMENTS
- Planetary boundaries: Guiding human development on a changing planet
- (2015) W. Steffen et al. SCIENCE
- Metaproteomic Identification of Diazotrophic Methanotrophs and Their Localization in Root Tissues of Field-Grown Rice Plants
- (2014) Zhihua Bao et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A comprehensive aligned nifH gene database: a multipurpose tool for studies of nitrogen-fixing bacteria
- (2014) John Christian Gaby et al. Database-The Journal of Biological Databases and Curation
- Genome Analysis Suggests that the Soil Oligotrophic Bacterium Agromonas oligotrophica (Bradyrhizobium oligotrophicum) Is a Nitrogen-Fixing Symbiont of Aeschynomene indica
- (2013) Takashi Okubo et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- EndophyticBradyrhizobiumspp. isolates from sugarcane obtained through different culture strategies
- (2013) Luc Felicianus Marie Rouws et al. Environmental Microbiology Reports
- Ca. Nitrososphaera and Bradyrhizobium are inversely correlated and related to agricultural practices in long-term field experiments
- (2013) Kateryna Zhalnina et al. Frontiers in Microbiology
- New insights into the evolutionary history of biological nitrogen fixation
- (2013) Eric S. Boyd et al. Frontiers in Microbiology
- Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2
- (2012) Martin Wu et al. BIOINFORMATICS
- Genome-wide analytical approaches using semi-quantitative expression proteomics for aromatic hydrocarbon metabolism in Pseudomonas putida F1
- (2012) Yasuhiro Kasahara et al. JOURNAL OF MICROBIOLOGICAL METHODS
- N2O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere
- (2012) Shoko Inaba et al. MICROBES AND ENVIRONMENTS
- Complete Genome Sequence of Bradyrhizobium sp. S23321: Insights into Symbiosis Evolution in Soil Oligotrophs
- (2012) Takashi Okubo et al. MICROBES AND ENVIRONMENTS
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Evolution of Bradyrhizobium-Aeschynomene Mutualism: Living Testimony of the Ancient World or Highly Evolved State?
- (2012) T. Okubo et al. PLANT AND CELL PHYSIOLOGY
- Possible contribution of Bradyrhizobium on nitrogen fixation in sweet potatoes
- (2012) Junko Terakado-Tonooka et al. PLANT AND SOIL
- Nitrate-Dependent N2O Emission from Intact Soybean Nodules via Denitrification by Bradyrhizobium japonicum Bacteroids
- (2011) Junta Hirayama et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Quality control and preprocessing of metagenomic datasets
- (2011) R. Schmieder et al. BIOINFORMATICS
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Molecular characterisation of the diazotrophic bacterial community in uninoculated and inoculated field-grown sugarcane (Saccharum sp.)
- (2011) Doreen Fischer et al. PLANT AND SOIL
- Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T
- (2011) Takakazu Kaneko et al. Genes
- Two seasons’ study on nifH gene expression and nitrogen fixation by diazotrophic endophytes in sugarcane (Saccharum spp. hybrids): expression of nifH genes similar to those of rhizobia
- (2010) Nisarat Thaweenut et al. PLANT AND SOIL
- Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
- (2010) J. G. Caporaso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Development of a Bacterial Cell Enrichment Method and its Application to the Community Analysis in Soybean Stems
- (2009) Seishi Ikeda et al. MICROBIAL ECOLOGY
- Diversity ofnifHgene pools in the rhizosphere of two cultivars of sorghum (Sorghum bicolor) treated with contrasting levels of nitrogen fertilizer
- (2008) Marcia Reed Rodrigues Coelho et al. FEMS MICROBIOLOGY LETTERS
- Genomic comparison of Bradyrhizobium japonicum strains with different symbiotic nitrogen-fixing capabilities and other Bradyrhizobiaceae members
- (2008) Manabu Itakura et al. ISME Journal
- Expressed nifH Genes of Endophytic Bacteria Detected in Field-Grown Sweet Potatoes (Ipomoea batatas L.)
- (2008) Junko Terakado-Tonooka et al. MICROBES AND ENVIRONMENTS
- A simple, fast, and accurate method of phylogenomic inference
- (2008) Martin Wu et al. GENOME BIOLOGY
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