Script of Scripts: A pragmatic workflow system for daily computational research
Published 2019 View Full Article
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Title
Script of Scripts: A pragmatic workflow system for daily computational research
Authors
Keywords
Data processing, Computer and information sciences, Sequence alignment, Engines, Syntax, Data visualization, Gene expression, Genome analysis
Journal
PLoS Computational Biology
Volume 15, Issue 2, Pages e1006843
Publisher
Public Library of Science (PLoS)
Online
2019-02-28
DOI
10.1371/journal.pcbi.1006843
References
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Related references
Note: Only part of the references are listed.- Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities
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- Bpipe: a tool for running and managing bioinformatics pipelines
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- Using probabilistic estimation of expression residuals (PEER) to obtain increased power and interpretability of gene expression analyses
- (2012) Oliver Stegle et al. Nature Protocols
- Ruffus: a lightweight Python library for computational pipelines
- (2010) Leo Goodstadt BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
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