4.8 Article

Rapid Determination of Fast Protein Dynamics from NMR Chemical Exchange Saturation Transfer Data

Journal

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
Volume 55, Issue 9, Pages 3117-3119

Publisher

WILEY-V C H VERLAG GMBH
DOI: 10.1002/anie.201511711

Keywords

CEST; lean model-free analysis; NMR spectroscopy; protein dynamics; spin relaxation

Funding

  1. National Science Foundation [MCB-1360966]
  2. NIH [5R01GM077643]
  3. Div Of Molecular and Cellular Bioscience
  4. Direct For Biological Sciences [1360966] Funding Source: National Science Foundation

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Functional motions of N-15-labeled proteins can be monitored by solution NMR spin relaxation experiments over a broad range of timescales. These experiments however typically take of the order of several days to a week per protein. Recently, NMR chemical exchange saturation transfer (CEST) experiments have emerged to probe slow millisecond motions complementing R-1 and CPMG-type experiments. CEST also simultaneously reports on site-specific R-1 and R-2 parameters. It is shown here how CEST-derived R-1 and R-2 relaxation parameters can be measured within a few hours at an accuracy comparable to traditional relaxation experiments. Using a lean version of the model-free approach S-2 order parameters can be determined that match those from the standard model-free approach applied to N-15 R-1, R-2, and {H-1}-N-15 NOE data. The new methodology, which is demonstrated for ubiquitin and arginine kinase (42kDa), should serve as an effective screening tool of protein dynamics from picosecond-to-millisecond timescales.

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