The complete chloroplast genome sequences of four Viola species (Violaceae) and comparative analyses with its congeneric species

The Complete Chloroplast Genome of Ye-Xing-Ba (Scrophularia dentata; Scrophulariaceae), an Alpine Tibetan Herb

(2016) Lianghong Ni et al.   PLoS One

Chloroplast genome structure in Ilex (Aquifoliaceae)

(2016) Xin Yao et al.   Scientific Reports

Chloroplast Genome Evolution in Actinidiaceae: clpP Loss, Heterogenous Divergence and Phylogenomic Practice

(2016) Wen-Cai Wang et al.   PLoS One

Complete Plastid Genome Sequencing of Four Tilia Species (Malvaceae): A Comparative Analysis and Phylogenetic Implications

(2015) Jie Cai et al.   PLoS One

Genomic Repeat Abundances Contain Phylogenetic Signal

(2014) S. Dodsworth et al.   SYSTEMATIC BIOLOGY

From Gene Trees to a Dated Allopolyploid Network: Insights from the Angiosperm Genus Viola (Violaceae)

(2014) Thomas Marcussen et al.   SYSTEMATIC BIOLOGY

A Phylogeny of the Violaceae (Malpighiales) Inferred from Plastid DNA Sequences: Implications for Generic Diversity and Intrafamilial Classification

(2014) Gregory A. Wahlert et al.   SYSTEMATIC BOTANY

Comparative Chloroplast Genomes of Camellia Species

(2013) Jun-Bo Yang et al.   PLoS One

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

(2011) Susann Wicke et al.   PLANT MOLECULAR BIOLOGY

High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)

(2011) Yun-Jie Zhang et al.   PLoS One

Inferring Species Networks from Gene Trees in High-Polyploid North American and Hawaiian Violets (Viola, Violaceae)

(2011) Thomas Marcussen et al.   SYSTEMATIC BIOLOGY

Infrageneric relationships of Korean Viola based on eight chloroplast markers

(2010) Ki-Oug YOO et al.   Journal of Systematics and Evolution

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Gene duplication, transfer, and evolution in the chloroplast genome

(2009) Ai-Sheng Xiong et al.   BIOTECHNOLOGY ADVANCES

The Chloroplast Genome Sequence of Mungbean (Vigna radiata) Determined by High-throughput Pyrosequencing: Structural Organization and Phylogenetic Relationships

(2009) S. Tangphatsornruang et al.   DNA RESEARCH

Complete chloroplast DNA sequence from a Korean endemic genus, Megaleranthis saniculifolia, and its evolutionary implications

(2009) Young-Kyu Kim et al.   MOLECULES AND CELLS