Key Maize Drought-Responsive Genes and Pathways Revealed by Comparative Transcriptome and Physiological Analyses of Contrasting Inbred Lines

Effects of drought stress and water recovery on physiological responses and gene expression in maize seedlings

(2018) Xiangbo Zhang et al.   BMC PLANT BIOLOGY

Transcriptomic analysis reveals the differentially expressed genes and pathways involved in drought tolerance in pearl millet [Pennisetum glaucum (L.) R. Br]

(2018) Ambika Dudhate et al.   PLoS One

Roles of E3 Ubiquitin-Ligases in Nuclear Protein Homeostasis during Plant Stress Responses

(2018) Irene Serrano et al.   Frontiers in Plant Science

Physiological and Proteomic Responses of Contrasting Alfalfa (Medicago sativa L.) Varieties to PEG-Induced Osmotic Stress

(2018) Cuimei Zhang et al.   Frontiers in Plant Science

Transcriptomic studies reveal a key metabolic pathway contributing to a well-maintained photosynthetic system under drought stress in foxtail millet (Setaria italica L.)

(2018) Weiping Shi et al.   PeerJ

Comparative de novo transcriptomic profiling of the salinity stress responsiveness in contrasting pearl millet lines

(2018) Harshraj Shinde et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

The Maize WRKY Transcription Factor ZmWRKY40 Confers Drought Resistance in Transgenic Arabidopsis

(2018) Chang-Tao Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comparative Proteomic and Physiological Analyses of Two Divergent Maize Inbred Lines Provide More Insights into Drought-Stress Tolerance Mechanisms

(2018) Tinashe Zenda et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

De novo assembly and analysis of the Pugionium cornutum (L.) Gaertn. transcriptome and identification of genes involved in the drought response

(2017) Ping Wang et al.   GENE

RNA-seq in kinetoplastids: A powerful tool for the understanding of the biology and host-pathogen interactions

(2017) Luz Helena Patino et al.   INFECTION GENETICS AND EVOLUTION

Early responses of mature Arabidopsis thaliana plants to reduced water potential in the agar-based polyethylene glycol infusion drought model

(2017) Andrej Frolov et al.   JOURNAL OF PLANT PHYSIOLOGY

Comparative Proteomics of Contrasting Maize Genotypes Provides Insights into Salt-Stress Tolerance Mechanisms

(2017) Meijie Luo et al.   JOURNAL OF PROTEOME RESEARCH

Gene regulation network behind drought escape, avoidance and tolerance strategies in black poplar ( Populus nigra L.)

(2017) Kubilay Yıldırım et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Enhancing Omics Research of Crop Responses to Drought under Field Conditions

(2017) Si Wu et al.   Frontiers in Plant Science

Cereal Crop Proteomics: Systemic Analysis of Crop Drought Stress Responses Towards Marker-Assisted Selection Breeding

(2017) Arindam Ghatak et al.   Frontiers in Plant Science

Genomewide Expression and Functional Interactions of Genes under Drought Stress in Maize

(2017) Nepolean Thirunavukkarasu et al.   International Journal of Genomics

Analysis of transcription factors among differentially expressed genes induced by drought stress in Populus davidiana

(2017) Bong-Gyu Mun et al.   3 Biotech

Analysis of transcription factors among differentially expressed genes induced by drought stress in Populus davidiana

(2017) Bong-Gyu Mun et al.   3 Biotech

Differential transcriptome profiling of chilling stress response between shoots and rhizomes of Oryza longistaminata using RNA sequencing

(2017) Ting Zhang et al.   PLoS One

A systems approach to a spatio-temporal understanding of the drought stress response in maize

(2017) Zhenyan Miao et al.   Scientific Reports

Adapting maize production to drought in the Northeast Farming Region of China

(2016) Xiaogang Yin et al.   EUROPEAN JOURNAL OF AGRONOMY

Expansins: roles in plant growth and potential applications in crop improvement

(2016) Prince Marowa et al.   PLANT CELL REPORTS

RNA-seq Analysis of Irrigated vs. Water Stressed Transcriptomes of Zea mays Cultivar Z59

(2016) B. Divya Bhanu et al.   Frontiers in Plant Science

Identification of Drought Tolerant Mechanisms in Maize Seedlings Based on Transcriptome Analysis of Recombination Inbred Lines

(2016) Haowei Min et al.   Frontiers in Plant Science

Recent Advances in Utilizing Transcription Factors to Improve Plant Abiotic Stress Tolerance by Transgenic Technology

(2016) Hongyan Wang et al.   Frontiers in Plant Science

Roles of ubiquitination-mediated protein degradation in plant responses to abiotic stresses

(2015) Zeyong Zhang et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

ZmCIPK8, a CBL-interacting protein kinase, regulates maize response to drought stress

(2015) Fuju Tai et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Prunus transcription factors: breeding perspectives

(2015) Valmor J. Bianchi et al.   Frontiers in Plant Science

Transcriptional regulation of drought response: a tortuous network of transcriptional factors

(2015) Dhriti Singh et al.   Frontiers in Plant Science

Phosphoproteomic analysis of the response of maize leaves to drought, heat and their combination stress

(2015) Xiuli Hu et al.   Frontiers in Plant Science

Proteomic Analysis of Seedling Roots of Two Maize Inbred Lines That Differ Significantly in the Salt Stress Response

(2015) Dezhou Cui et al.   PLoS One

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

The Cotton WRKY Transcription Factor GhWRKY17 Functions in Drought and Salt Stress in Transgenic Nicotiana benthamiana Through ABA Signaling and the Modulation of Reactive Oxygen Species Production

(2014) Huiru Yan et al.   PLANT AND CELL PHYSIOLOGY

Global reprogramming of transcription and metabolism inMedicago truncatuladuring progressive drought and after rewatering

(2014) JI-YI ZHANG et al.   PLANT CELL AND ENVIRONMENT

Wheat and barley dehydrins under cold, drought, and salinity – what can LEA-II proteins tell us about plant stress response?

(2014) Klára Kosová et al.   Frontiers in Plant Science

Physiological, Biochemical, and Molecular Mechanisms of Heat Stress Tolerance in Plants

(2013) Mirza Hasanuzzaman et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Structure, Function and Networks of Transcription Factors Involved in Abiotic Stress Responses

(2013) Søren Lindemose et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptome Profile Analysis of Maize Seedlings in Response to High-salinity, Drought and Cold Stresses by Deep Sequencing

(2013) Xiaohui Shan et al.   PLANT MOLECULAR BIOLOGY REPORTER

Genome-Wide Functional Analysis of Cotton (Gossypium hirsutum) in Response to Drought

(2013) Yun Chen et al.   PLoS One

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

MYB transcription factor genes as regulators for plant responses: an overview

(2013) Supriya Ambawat et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Effects of Drought on Gene Expression in Maize Reproductive and Leaf Meristem Tissue Revealed by RNA-Seq

(2012) A. Kakumanu et al.   PLANT PHYSIOLOGY

Transcript profiling during salt stress of young cotton (Gossypium hirsutum) seedlings via Solexa sequencing

(2011) Gang Wang et al.   ACTA PHYSIOLOGIAE PLANTARUM

Abiotic stress tolerance mediated by protein ubiquitination

(2011) W. J. Lyzenga et al.   JOURNAL OF EXPERIMENTAL BOTANY

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

BIOCHEMICAL CHANGES IN MAIZE SEEDLINGS EXPOSED TO DROUGHT STRESS CONDITIONS AT DIFFERENT NITROGEN LEVELS

(2010) Ali Ahmadi et al.   JOURNAL OF PLANT NUTRITION

OsCIPK31, a CBL-interacting protein kinase is involved in germination and seedling growth under abiotic stress conditions in rice plants

(2010) Hai-long Piao et al.   MOLECULES AND CELLS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants

(2010) Sarvajeet Singh Gill et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Genome-wide transcriptome analysis of two maize inbred lines under drought stress

(2009) Jun Zheng et al.   PLANT MOLECULAR BIOLOGY

CIRCADIAN CLOCK ASSOCIATED1 and LATE ELONGATED HYPOCOTYL Function Synergistically in the Circadian Clock of Arabidopsis

(2009) S. X. Lu et al.   PLANT PHYSIOLOGY

The MYB96 Transcription Factor Mediates Abscisic Acid Signaling during Drought Stress Response in Arabidopsis

(2009) P. J. Seo et al.   PLANT PHYSIOLOGY

Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses

(2009) K. Nakashima et al.   PLANT PHYSIOLOGY

Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell

(2008) M. M. Chaves et al.   ANNALS OF BOTANY

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Glutaredoxins and thioredoxins in plants

(2007) Yves Meyer et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH