De novo transcriptomic analysis of gonad of Strongylocentrotus nudus and gene discovery for biosynthesis of polyunsaturated fatty acids

Identification, expression analysis, and the regulating function on C/EBPs of KLF10 in Dalian purple sea urchin, Strongylocentrotus nudus

(2017) Kaikai Wu et al.   GENOME

Fatty Acid Elongase 7 Catalyzes Lipidome Remodeling Essential for Human Cytomegalovirus Replication

(2015) John G. Purdy et al.   Cell Reports

Involvement of CitCHX and CitDIC in Developmental-Related and Postharvest-Hot-Air Driven Citrate Degradation in Citrus Fruits

(2015) Qiong Lin et al.   PLoS One

Identification of large intergenic non-coding RNAs in bovine muscle using next-generation transcriptomic sequencing

(2014) Coline Billerey et al.   BMC GENOMICS

PUFA Biosynthesis Pathway in Marine Scallop Chlamys nobilis Reeve

(2014) Helu Liu et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Diversification of substrate specificities in teleostei Fads2: characterization of Δ4 and Δ6Δ5 desaturases ofChirostoma estor

(2014) Jorge Fonseca-Madrigal et al.   JOURNAL OF LIPID RESEARCH

Lipids and Fatty Acids of Nudibranch Mollusks: Potential Sources of Bioactive Compounds

(2014) Natalia Zhukova   Marine Drugs

Degradation state of algal diets affects fatty acid composition but not size of red urchin gonads

(2014) WW Raymond et al.   MARINE ECOLOGY PROGRESS SERIES

Functional characterization of a Δ5-like fatty acyl desaturase and its expression during early embryogenesis in the noble scallop Chlamys nobilis Reeve

(2014) Helu Liu et al.   MOLECULAR BIOLOGY REPORTS

Polyunsaturated fatty acids and their metabolites in brain function and disease

(2014) Richard P. Bazinet et al.   NATURE REVIEWS NEUROSCIENCE

Differences in Muscle Transcriptome among Pigs Phenotypically Extreme for Fatty Acid Composition

(2014) Anna Puig-Oliveras et al.   PLoS One

Historical perspectives on the impact of n-3 and n-6 nutrients on health

(2014) Bill Lands   PROGRESS IN LIPID RESEARCH

Characterization of two Δ5 fatty acyl desaturases in abalone (Haliotis discus hannai Ino)

(2013) Mingzhu Li et al.   AQUACULTURE

Deep transcriptome-sequencing and proteome analysis of the hydrothermal vent annelid Alvinella pompejana identifies the CvP-bias as a robust measure of eukaryotic thermostability

(2013) Thomas Holder et al.   Biology Direct

A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly

(2013) Warren R Francis et al.   BMC GENOMICS

Analysis of porcine adipose tissue transcriptome reveals differences in de novo fatty acid synthesis in pigs with divergent muscle fatty acid composition

(2013) Jordi Corominas et al.   BMC GENOMICS

Identification of novel exons and transcripts by comprehensive RNA-Seq of horn cancer transcriptome in Bos indicus

(2013) Subhash J. Jakhesara et al.   JOURNAL OF BIOTECHNOLOGY

SCD1 activity in muscle increases triglyceride PUFA content, exercise capacity, and PPARδ expression in mice

(2013) Michael P. Rogowski et al.   JOURNAL OF LIPID RESEARCH

Biosynthesis of Polyunsaturated Fatty Acids in Marine Invertebrates: Recent Advances in Molecular Mechanisms

(2013) Óscar Monroig et al.   Marine Drugs

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Effects of lipid extract of sea urchins gonads in metabolic syndrome animal model

(2013) IE Makarenko et al.   PLANTA MEDICA

Transcriptome Analysis of Androgenic Gland for Discovery of Novel Genes from the Oriental River Prawn, Macrobrachium nipponense, Using Illumina Hiseq 2000

(2013) Shubo Jin et al.   PLoS One

Polyketide genes in the marine spongePlakortis simplex: a new group of mono-modular type I polyketide synthases from sponge symbionts

(2013) Gerardo Della Sala et al.   Environmental Microbiology Reports

Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study

(2012) Lei Sun et al.   BMC BIOINFORMATICS

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

(2012) Dejun Li et al.   BMC GENOMICS

Fatty acid profiles during gametogenesis in sea urchin (Paracentrotus lividus): Effects of dietary inputs on gonad, egg and embryo profiles

(2012) Stefano Carboni et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Mannan-Binding Lectin of the Sea Urchin Strongylocentrotus nudus

(2012) Aleksandr A. Bulgakov et al.   MARINE BIOTECHNOLOGY

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Transcriptome Sequencing and Characterization for the Sea Cucumber Apostichopus japonicus (Selenka, 1867)

(2012) Huixia Du et al.   PLoS One

Functional Desaturase Fads1 (Δ5) and Fads2 (Δ6) Orthologues Evolved before the Origin of Jawed Vertebrates

(2012) Luís Filipe Costa Castro et al.   PLoS One

Biochemical characterization of the very long-chain fatty acid elongase ELOVL7

(2011) Tatsuro Naganuma et al.   FEBS LETTERS

Expression pattern of polyketide synthase-2 during sea urchin development

(2011) Adam Beeble et al.   GENE EXPRESSION PATTERNS

The Front-end Desaturase: Structure, Function, Evolution and Biotechnological Use

(2011) Dauenpen Meesapyodsuk et al.   LIPIDS

Seasonal variation in the effects of food availability on gametogenesis in the purple urchin (Strongylocentrotus purpuratus)

(2011) Christina A. Dodge et al.   MARINE BIOLOGY

Identification of a Δ5-like Fatty Acyl Desaturase from the Cephalopod Octopus vulgaris (Cuvier 1797) Involved in the Biosynthesis of Essential Fatty Acids

(2011) Óscar Monroig et al.   MARINE BIOTECHNOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX

(2011) Rui Hou et al.   PLoS One

Multiple genes for functional ∆6 fatty acyl desaturases (Fad) in Atlantic salmon (Salmo salar L.): Gene and cDNA characterization, functional expression, tissue distribution and nutritional regulation

(2010) Óscar Monroig et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish

(2010) Li-xin Xiang et al.   BMC GENOMICS

Extraction of lipid from sea urchin (Strongylocentrotus nudus) gonad by enzyme-assisted aqueous and supercritical carbon dioxide methods

(2010) Bei-Wei Zhu et al.   EUROPEAN FOOD RESEARCH AND TECHNOLOGY

Demospongic Acids Revisited

(2010) Jean-Michel Kornprobst et al.   Marine Drugs

Non-methylene-interrupted fatty acids from marine invertebrates: Occurrence, characterization and biological properties

(2009) Gilles Barnathan   BIOCHIMIE

Transcript length bias in RNA-seq data confounds systems biology

(2009) Alicia Oshlack et al.   Biology Direct

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

(2009) Eli Meyer et al.   BMC GENOMICS

Males and females gonad fatty acids of the sea urchins Paracentrotus lividus and Arbacia lixula (Echinodermata)

(2009) Inés Martínez-Pita et al.   HELGOLAND MARINE RESEARCH

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Fatty acid profiles in the gonads of the sea urchin Strongylocentrotus droebachiensis on natural algal diets

(2008) JR Kelly et al.   MARINE ECOLOGY PROGRESS SERIES