More grist for the mill? Species delimitation in the genomic era and its implications for conservation

Hybrid speciation in birds, with special reference to Darwin's finches

(2018) Geoffrey E. Hill et al.   JOURNAL OF AVIAN BIOLOGY

Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater

(2018) Xuming Zhou et al.   Nature Communications

Prioritizing phylogenetic diversity captures functional diversity unreliably

(2018) Florent Mazel et al.   Nature Communications

The genomic landscape at a late stage of stickleback speciation: High genomic divergence interspersed by small localized regions of introgression

(2018) Mark Ravinet et al.   PLoS Genetics

Limited introgression supports division of giraffe into four species

(2018) Sven Winter et al.   Ecology and Evolution

Multispecies coalescent delimits structure, not species

(2017) Jeet Sukumaran et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Revisiting Adaptive Potential, Population Size, and Conservation

(2017) Ary A. Hoffmann et al.   TRENDS IN ECOLOGY & EVOLUTION

Composite likelihood method for inferring local pedigrees

(2017) Amy Ko et al.   PLoS Genetics

Complex modular architecture around a simple toolkit of wing pattern genes

(2017) Steven M. Van Belleghem et al.   Nature Ecology & Evolution

Genomic signatures of adaptive introgression from European mouflon into domestic sheep

(2017) Mario Barbato et al.   Scientific Reports

Multi-locus Analyses Reveal Four Giraffe Species Instead of One

(2016) Julian Fennessy et al.   CURRENT BIOLOGY

Studying the genetic basis of speciation in high gene flow marine invertebrates

(2016) Grant H. Pogson   Current Zoology

Genomic evidence for polyphyletic origins and interlineage gene flow within complex taxa: a case study ofPicea brachytylain the Qinghai-Tibet Plateau

(2016) Dafu Ru et al.   MOLECULAR ECOLOGY

Genomics of hybridization and its evolutionary consequences

(2016) Richard J. Abbott et al.   MOLECULAR ECOLOGY

Recurrent hybridization and recent origin obscure phylogenetic relationships within the ‘white-headed’ gull ( Larus sp.) complex

(2016) Sarah A. Sonsthagen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Making sense of genomic islands of differentiation in light of speciation

(2016) Jochen B. W. Wolf et al.   NATURE REVIEWS GENETICS

Chimpanzee genomic diversity reveals ancient admixture with bonobos

(2016) M. de Manuel et al.   SCIENCE

Bayesian Poisson tree processes and multispecies coalescent models shed new light on the diversification of Nawab butterflies in the Solomon Islands (Nymphalidae, Charaxinae,Polyura)

(2016) Emmanuel F.A. Toussaint et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Studying the genetic basis of speciation in high gene flow marine invertebrates

(2016) Grant H. Pogson   Current Zoology

The BPP program for species tree estimation and species delimitation

(2015) Ziheng Yang   Current Zoology

Drifting to oblivion? Rapid genetic differentiation in an endangered lizard following habitat fragmentation and drought

(2015) Amy G. Vandergast et al.   DIVERSITY AND DISTRIBUTIONS

The Avian Hybrids Project: gathering the scientific literature on avian hybridization

(2015) Jente Ottenburghs et al.   IBIS

Evidence of rapid change in genetic structure and diversity during range expansion in a recovering large terrestrial carnivore

(2015) S. B. Hagen et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The BPP program for species tree estimation and species delimitation

(2015) Ziheng Yang   Current Zoology

The role of homoploid hybridization in evolution: A century of studies synthesizing genetics and ecology

(2014) S. B. Yakimowski et al.   AMERICAN JOURNAL OF BOTANY

Lineage Sorting in Apes

(2014) Thomas Mailund et al.   Annual Review of Genetics

Evolutionary conservation-evaluating the adaptive potential of species

(2014) Christophe Eizaguirre et al.   Evolutionary Applications

Bears in a Forest of Gene Trees: Phylogenetic Inference Is Complicated by Incomplete Lineage Sorting and Gene Flow

(2014) Verena E. Kutschera et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

(2014) Tami E. Cruickshank et al.   MOLECULAR ECOLOGY

Whole-genome analyses resolve early branches in the tree of life of modern birds

(2014) E. D. Jarvis et al.   SCIENCE

Crossing the Species Barrier: Genomic Hotspots of Introgression between Two Highly Divergent Ciona intestinalis Species

(2013) Camille Roux et al.   MOLECULAR BIOLOGY AND EVOLUTION

Using biogeographical history to inform conservation: the case of Preble's meadow jumping mouse

(2013) Jason L. Malaney et al.   MOLECULAR ECOLOGY

Species splitting puts conservation at risk

(2013) Frank E. Zachos   NATURE

The complete genome sequence of a Neanderthal from the Altai Mountains

(2013) Kay Prüfer et al.   NATURE

Are There Really Twice as Many Bovid Species as We Thought?

(2013) Rasmus Heller et al.   SYSTEMATIC BIOLOGY

Species Delimitation Using Bayes Factors: Simulations and Application to the Sceloporus scalaris Species Group (Squamata: Phrynosomatidae)

(2013) Jared A. Grummer et al.   SYSTEMATIC BIOLOGY

Implications of different species concepts for conserving biodiversity

(2012) Richard Frankham et al.   BIOLOGICAL CONSERVATION

The nature of species: A rejoinder to Zachos et al.

(2012) Colin P. Groves   MAMMALIAN BIOLOGY

Species inflation and taxonomic artefacts—A critical comment on recent trends in mammalian classification

(2012) Frank E. Zachos et al.   MAMMALIAN BIOLOGY

Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

(2012) Kanchon K. Dasmahapatra et al.   NATURE

Financial Costs of Meeting Global Biodiversity Conservation Targets: Current Spending and Unmet Needs

(2012) D. P. McCarthy et al.   SCIENCE

A High-Coverage Genome Sequence from an Archaic Denisovan Individual

(2012) M. Meyer et al.   SCIENCE

Phylogenetic diversity and nature conservation: where are we?

(2012) Marten Winter et al.   TRENDS IN ECOLOGY & EVOLUTION

Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure

(2011) PABLO OROZCO-terWENGEL et al.   MOLECULAR ECOLOGY

Genomic islands of divergence in hybridizingHeliconiusbutterflies identified by large-scale targeted sequencing

(2011) Nicola J. Nadeau et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Explaining patterns in modern ruminant diversity: contingency or constraint?

(2010) JAMES J. N. HEYWOOD   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Using Environmental Correlations to Identify Loci Underlying Local Adaptation

(2010) G. Coop et al.   GENETICS

Quantitative criteria for species delimitation

(2010) JOSEPH A. TOBIAS et al.   IBIS

Genetic history of an archaic hominin group from Denisova Cave in Siberia

(2010) David Reich et al.   NATURE

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

Integrative Taxonomy: A Multisource Approach to Exploring Biodiversity

(2009) Birgit C. Schlick-Steiner et al.   Annual Review of Entomology

Catch composition and conservation management of a human–dolphin cooperative cast-net fishery in the Ayeyarwady River, Myanmar

(2009) Brian D. Smith et al.   BIOLOGICAL CONSERVATION

Expanding protected areas beyond their terrestrial comfort zone: Identifying spatial options for river conservation

(2009) Jeanne L. Nel et al.   BIOLOGICAL CONSERVATION

The impact of taxonomic change on conservation: Does it kill, can it save, or is it just irrelevant?

(2009) W.R. Morrison et al.   BIOLOGICAL CONSERVATION

Isolation with Migration Models for More Than Two Populations

(2009) Jody Hey   MOLECULAR BIOLOGY AND EVOLUTION

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS