Array CGH-based detection of CNV regions and their potential association with reproduction and other economic traits in Holsteins

Genome-wide copy number variant analysis reveals variants associated with 10 diverse production traits in Holstein cattle

(2018) Yang Zhou et al.   BMC GENOMICS

Symposium review: Breeding a better cow—Will she be adaptable? 1

(2018) D.P. Berry   JOURNAL OF DAIRY SCIENCE

A genome wide association study between CNVs and quantitative traits in Brown Swiss cattle

(2017) R.T.M.M. Prinsen et al.   Livestock Science

Distribution and Functionality of Copy Number Variation across European Cattle Populations

(2017) Maulik Upadhyay et al.   Frontiers in Genetics

Association study and expression analysis of CYP4A11 gene copy number variation in Chinese cattle

(2017) Mingjuan Yang et al.   Scientific Reports

Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus

(2016) Yang Zhou et al.   BMC GENOMICS

Copy number variations and genome-wide associations reveal putative genes and metabolic pathways involved with the feed conversion ratio in beef cattle

(2016) Miguel Henrique de Almeida Santana et al.   JOURNAL OF APPLIED GENETICS

Associated effects of copy number variants on economically important traits in Spanish Holstein dairy cattle

(2016) Neila Ben Sassi et al.   JOURNAL OF DAIRY SCIENCE

Ctr9, a Key Component of the Paf1 Complex Affects Proliferation and Terminal Differentiation in the Developing Drosophila Nervous System

(2016) S. Bahrampour et al.   G3-Genes Genomes Genetics

Genome wide CNV analysis reveals additional variants associated with milk production traits in Holsteins

(2014) Lingyang Xu et al.   BMC GENOMICS

The global landscape of intron retentions in lung adenocarcinoma

(2014) Qu Zhang et al.   BMC Medical Genomics

Copy number variation in the genomes of domestic animals

(2012) A. Clop et al.   ANIMAL GENETICS

The many roles of the conserved eukaryotic Paf1 complex in regulating transcription, histone modifications, and disease states

(2012) Brett N. Tomson et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array

(2012) Yali Hou et al.   BMC GENOMICS

Copy number variation of individual cattle genomes using next-generation sequencing

(2012) D. M. Bickhart et al.   GENOME RESEARCH

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

(2011) Paul Stothard et al.   BMC GENOMICS

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows

(2011) John B Cole et al.   BMC GENOMICS

Characterising chromosome rearrangements: recent technical advances in molecular cytogenetics

(2011) S Le Scouarnec et al.   HEREDITY

Mapping copy number variation by population-scale genome sequencing

(2011) Ryan E. Mills et al.   NATURE

Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants

(2011) Dalila Pinto et al.   NATURE BIOTECHNOLOGY

Genome structural variation discovery and genotyping

(2011) Can Alkan et al.   NATURE REVIEWS GENETICS

Genome-wide association mapping for female fertility traits in Danish and Swedish Holstein cattle

(2010) G. Sahana et al.   ANIMAL GENETICS

Analysis of copy loss and gain variations in Holstein cattle autosomes using BeadChip SNPs

(2010) Eyal Seroussi et al.   BMC GENOMICS

Analysis of copy number variations among diverse cattle breeds

(2010) G. E. Liu et al.   GENOME RESEARCH

Mechanisms of mosaicism, chimerism and uniparental disomy identified by single nucleotide polymorphism array analysis

(2010) Laura K. Conlin et al.   HUMAN MOLECULAR GENETICS

A genome-wide association study for milk production traits in Danish Jersey cattle using a 50K single nucleotide polymorphism chip1

(2010) M. D. Mai et al.   JOURNAL OF ANIMAL SCIENCE

Ontological evaluation of transcriptional differences between sperm of infertile males and fertile donors using microarray analysis

(2010) Sandra García-Herrero et al.   JOURNAL OF ASSISTED REPRODUCTION AND GENETICS

Copy Number Variation in Human Health, Disease, and Evolution

(2009) Feng Zhang et al.   Annual Review of Genomics and Human Genetics

Distribution and location of genetic effects for dairy traits

(2009) J.B. Cole et al.   JOURNAL OF DAIRY SCIENCE

Origins and functional impact of copy number variation in the human genome

(2009) Donald F. Conrad et al.   NATURE

Fine-mapping QTL for mastitis resistance on BTA9 in three Nordic red cattle breeds

(2008) G. Sahana et al.   ANIMAL GENETICS

Study of gene expression profile during cord blood-associated megakaryopoiesis

(2008) Che Kang Lim et al.   EUROPEAN JOURNAL OF HAEMATOLOGY

Mouse segmental duplication and copy number variation

(2008) Xinwei She et al.   NATURE GENETICS

A robust statistical method for case-control association testing with copy number variation

(2008) Chris Barnes et al.   NATURE GENETICS