Metagenomic analysis of microbe-mediated vitamin metabolism in the human gut microbiome

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Dynamics of metatranscription in the inflammatory bowel disease gut microbiome

(2018) Melanie Schirmer et al.   Nature Microbiology

Gut microbiota dysbiosis is associated with malnutrition and reduced plasma amino acid levels: Lessons from genome-scale metabolic modeling

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(2015) Michael Jaehme et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Fortification and Health: Challenges and Opportunities

(2015) Johanna T Dwyer et al.   Advances in Nutrition

Systematic genome assessment of B-vitamin biosynthesis suggests co-operation among gut microbes

(2015) Stefanía Magnúsdóttir et al.   Frontiers in Genetics

The Integrative Human Microbiome Project: Dynamic Analysis of Microbiome-Host Omics Profiles during Periods of Human Health and Disease

(2014)   Cell Host & Microbe

Vitamin B 12 as a Modulator of Gut Microbial Ecology

(2014) Patrick H. Degnan et al.   Cell Metabolism

Choosing and using multiple traits in functional diversity research

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An integrated catalog of reference genes in the human gut microbiome

(2014) Junhua Li et al.   NATURE BIOTECHNOLOGY

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Genomic distribution of B-vitamin auxotrophy and uptake transporters in environmental bacteria from theChloroflexiphylum

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Metagenomic Data Utilization and Analysis (MEDUSA) and Construction of a Global Gut Microbial Gene Catalogue

(2014) Fredrik H. Karlsson et al.   PLoS Computational Biology

Richness of human gut microbiome correlates with metabolic markers

(2013) Emmanuelle Le Chatelier et al.   NATURE

Bacteria as vitamin suppliers to their host: a gut microbiota perspective

(2012) Jean Guy LeBlanc et al.   CURRENT OPINION IN BIOTECHNOLOGY

Micronutrient deficiencies in inflammatory bowel disease: From A to zinc

(2012) Caroline Hwang et al.   INFLAMMATORY BOWEL DISEASES

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Species Interactions Alter Evolutionary Responses to a Novel Environment

(2012) Diane Lawrence et al.   PLOS BIOLOGY

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

(2012) Sahar Abubucker et al.   PLoS Computational Biology

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Folate Production by Probiotic Bacteria

(2011) Maddalena Rossi et al.   Nutrients

Towards an assessment of multiple ecosystem processes and services via functional traits

(2010) Francesco de Bello et al.   BIODIVERSITY AND CONSERVATION

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

A Novel Class of Modular Transporters for Vitamins in Prokaryotes

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