De novoidentification of replication-timing domains in the human genome by deep learning
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
De novoidentification of replication-timing domains in the human genome by deep learning
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 32, Issue 5, Pages 641-649
Publisher
Oxford University Press (OUP)
Online
2015-11-07
DOI
10.1093/bioinformatics/btv643
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Deep learning of the tissue-regulated splicing code
- (2014) Michael K. K. Leung et al. BIOINFORMATICS
- Topologically associating domains are stable units of replication-timing regulation
- (2014) Benjamin D. Pope et al. NATURE
- The human splicing code reveals new insights into the genetic determinants of disease
- (2014) H. Y. Xiong et al. SCIENCE
- Representation Learning: A Review and New Perspectives
- (2013) Y. Bengio et al. IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE
- Aberrant DNA replication in cancer
- (2012) Motoshi Suzuki et al. MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
- Unsupervised pattern discovery in human chromatin structure through genomic segmentation
- (2012) Michael M Hoffman et al. NATURE METHODS
- ChromHMM: automating chromatin-state discovery and characterization
- (2012) Jason Ernst et al. NATURE METHODS
- DNA replication timing and selection shape the landscape of nucleotide variation in cancer genomes
- (2012) Yong H Woo et al. Nature Communications
- Context-Dependent Pre-Trained Deep Neural Networks for Large-Vocabulary Speech Recognition
- (2011) G. E. Dahl et al. IEEE Transactions on Audio Speech and Language Processing
- Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site
- (2011) Anne Letessier et al. NATURE
- Mutations in origin recognition complex gene ORC4 cause Meier-Gorlin syndrome
- (2011) Duane L Guernsey et al. NATURE GENETICS
- Mutations in ORC1, encoding the largest subunit of the origin recognition complex, cause microcephalic primordial dwarfism resembling Meier-Gorlin syndrome
- (2011) Louise S Bicknell et al. NATURE GENETICS
- Mutations in the pre-replication complex cause Meier-Gorlin syndrome
- (2011) Louise S Bicknell et al. NATURE GENETICS
- Eukaryotic Chromosome DNA Replication: Where, When, and How?
- (2010) Hisao Masai et al. Annual Review of Biochemistry
- Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
- (2010) T. Ryba et al. GENOME RESEARCH
- Discovery and characterization of chromatin states for systematic annotation of the human genome
- (2010) Jason Ernst et al. NATURE BIOTECHNOLOGY
- Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome
- (2009) M. Schwaiger et al. GENES & DEVELOPMENT
- Sequencing newly replicated DNA reveals widespread plasticity in human replication timing
- (2009) R. S. Hansen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
- Global organization of replication time zones of the mouse genome
- (2008) S. Farkash-Amar et al. GENOME RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now