APTANI: a computational tool to select aptamers through sequence-structure motif analysis of HT-SELEX data

FASTAptamer: A Bioinformatic Toolkit for High-throughput Sequence Analysis of Combinatorial Selections

(2015) Khalid K Alam et al.   Molecular Therapy-Nucleic Acids

Identification of sequence-structure RNA binding motifs for SELEX-derived aptamers

(2012) J. Hoinka et al.   BIOINFORMATICS

Aptamer-Mediated Blockade of IL4R  Triggers Apoptosis of MDSCs and Limits Tumor Progression

(2012) F. Roth et al.   CANCER RESEARCH

G-quadruplex DNA Aptamers and their Ligands: Structure, Function and Application

(2012) W. O. Tucker et al.   CURRENT PHARMACEUTICAL DESIGN

High-throughput sequence analysis reveals structural diversity and improved potency among RNA inhibitors of HIV reverse transcriptase

(2012) Mark A. Ditzler et al.   NUCLEIC ACIDS RESEARCH

Automated 3D structure composition for large RNAs

(2012) Mariusz Popenda et al.   NUCLEIC ACIDS RESEARCH

Rapid Identification of Cell-Specific, Internalizing RNA Aptamers with Bioinformatics Analyses of a Cell-Based Aptamer Selection

(2012) William H. Thiel et al.   PLoS One

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

An RNA aptamer that specifically binds pancreatic adenocarcinoma up-regulated factor inhibits migration and growth of pancreatic cancer cells

(2011) Yun-Hee Kim et al.   CANCER LETTERS

Aptamers as Therapeutics in Cardiovascular Diseases

(2011) P. Wang et al.   CURRENT MEDICINAL CHEMISTRY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Aptamers as therapeutics

(2010) Anthony D. Keefe et al.   NATURE REVIEWS DRUG DISCOVERY