Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 31, Issue 22, Pages 3625-3630
Publisher
Oxford University Press (OUP)
Online
2015-07-24
DOI
10.1093/bioinformatics/btv425
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data
- (2013) Franck Rapaport et al. GENOME BIOLOGY
- A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis
- (2012) M.-A. Dillies et al. BRIEFINGS IN BIOINFORMATICS
- Revisiting Global Gene Expression Analysis
- (2012) Jakob Lovén et al. CELL
- Synthetic spike-in standards for RNA-seq experiments
- (2011) L. Jiang et al. GENOME RESEARCH
- Sequencing technology does not eliminate biological variability
- (2011) Kasper D Hansen et al. NATURE BIOTECHNOLOGY
- baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data
- (2010) Thomas J Hardcastle et al. BMC BIOINFORMATICS
- Statistical Design and Analysis of RNA Sequencing Data
- (2010) P. L. Auer et al. GENETICS
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Ensembl 2011
- (2010) P. Flicek et al. NUCLEIC ACIDS RESEARCH
- A scaling normalization method for differential expression analysis of RNA-seq data
- (2010) Mark D Robinson et al. GENOME BIOLOGY
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
- (2008) J. C. Marioni et al. GENOME RESEARCH
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now