A trimming-and-retrieving alignment scheme for reduced representation bisulfite sequencing: Fig. 1.

MethyQA: a pipeline for bisulfite-treated methylation sequencing quality assessment

(2013) Shuying Sun et al.   BMC BIOINFORMATICS

BRAT-BW: efficient and accurate mapping of bisulfite-treated reads

(2012) Elena Y. Harris et al.   BIOINFORMATICS

DNA methylome analysis using short bisulfite sequencing data

(2012) Felix Krueger et al.   NATURE METHODS

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

(2011) Felix Krueger et al.   BIOINFORMATICS

RRBSMAP: a fast, accurate and user-friendly alignment tool for reduced representation bisulfite sequencing

(2011) Yuanxin Xi et al.   BIOINFORMATICS

BRAT: bisulfite-treated reads analysis tool

(2009) Elena Y. Harris et al.   BIOINFORMATICS