Fuse: multiple network alignment via data fusion

Accurate multiple network alignment through context-sensitive random walk

(2015) Hyundoo Jeong et al.   BMC Systems Biology

Node Handprinting: A Scalable and Accurate Algorithm for Aligning Multiple Biological Networks

(2015) Alex Radu et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

A comparison of algorithms for the pairwise alignment of biological networks

(2014) Connor Clark et al.   BIOINFORMATICS

Integration of molecular network data reconstructs Gene Ontology

(2014) Vladimir Gligorijević et al.   BIOINFORMATICS

NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks

(2013) Jialu Hu et al.   BIOINFORMATICS

BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks

(2013) Ferhat Alkan et al.   BIOINFORMATICS

Predicting Protein–Protein Interactions from Multimodal Biological Data Sources via Nonnegative Matrix Tri-Factorization

(2013) Hua Wang et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

High-resolution network biology: connecting sequence with function

(2013) Colm J. Ryan et al.   NATURE REVIEWS GENETICS

Integrative approaches for finding modular structure in biological networks

(2013) Koyel Mitra et al.   NATURE REVIEWS GENETICS

SMETANA: Accurate and Scalable Algorithm for Probabilistic Alignment of Large-Scale Biological Networks

(2013) Sayed Mohammad Ebrahim Sahraeian et al.   PLoS One

DNA hydrogel-based supercapacitors operating in physiological fluids

(2013) Jaehyun Hur et al.   Scientific Reports

The BioGRID interaction database: 2013 update

(2012) Andrew Chatr-aryamontri et al.   NUCLEIC ACIDS RESEARCH

Protein-protein interactions: Making sense of networks via graph-theoretic modeling

(2010) Nataša Pržulj   BIOESSAYS

Topological network alignment uncovers biological function and phylogeny

(2010) O. Kuchaiev et al.   Journal of the Royal Society Interface

IsoRankN: spectral methods for global alignment of multiple protein networks

(2009) C.-S. Liao et al.   BIOINFORMATICS

Matrix Factorization Techniques for Recommender Systems

(2009) Yehuda Koren et al.   COMPUTER

NetworkBLAST: comparative analysis of protein networks

(2008) M. Kalaev et al.   BIOINFORMATICS

Global alignment of multiple protein interaction networks with application to functional orthology detection

(2008) R. Singh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA