EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry data

Analysis and Interpretation of Imaging Mass Spectrometry Data by Clustering Mass-to-Charge Images According to Their Spatial Similarity

(2013) Theodore Alexandrov et al.   ANALYTICAL CHEMISTRY

Testing for presence of known and unknown molecules in imaging mass spectrometry

(2013) Theodore Alexandrov et al.   BIOINFORMATICS

Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

(2012) Boyko Kakaradov et al.   BMC BIOINFORMATICS

New Analysis Workflow for MALDI Imaging Mass Spectrometry: Application to the Discovery and Identification of Potential Markers of Childhood Absence Epilepsy

(2012) Mélanie Lagarrigue et al.   JOURNAL OF PROTEOME RESEARCH

Multivariate analyses for biomarkers hunting and validation through on-tissue bottom-up or in-source decay in MALDI-MSI: application to prostate cancer

(2011) David Bonnel et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Normalization in MALDI-TOF imaging datasets of proteins: practical considerations

(2011) Sören-Oliver Deininger et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Efficient spatial segmentation of large imaging mass spectrometry datasets with spatially aware clustering

(2011) T. Alexandrov et al.   BIOINFORMATICS

MALDI Imaging Mass Spectrometry (MALDI-IMS)―Application of Spatial Proteomics for Ovarian Cancer Classification and Diagnosis

(2011) Johan O. R. Gustafsson et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The evolving field of imaging mass spectrometry and its impact on future biological research

(2011) Jeramie D. Watrous et al.   JOURNAL OF MASS SPECTROMETRY

AMASS: Algorithm for MSI Analysis by Semi-supervised Segmentation

(2011) Jocelyne Bruand et al.   JOURNAL OF PROTEOME RESEARCH

Multiple Statistical Analysis Techniques Corroborate Intratumor Heterogeneity in Imaging Mass Spectrometry Datasets of Myxofibrosarcoma

(2011) Emrys A. Jones et al.   PLoS One

A simple and fast method to determine the parameters for fuzzy c–means cluster analysis

(2010) Veit Schwämmle et al.   BIOINFORMATICS

Spatial Segmentation of Imaging Mass Spectrometry Data with Edge-Preserving Image Denoising and Clustering

(2010) Theodore Alexandrov et al.   JOURNAL OF PROTEOME RESEARCH

Imaging Mass Spectrometry for Visualization of Drug and Endogenous Metabolite Distribution: Toward In Situ Pharmacometabolomes

(2009) Yuki Sugiura et al.   Journal of Neuroimmune Pharmacology

MALDI Imaging Combined with Hierarchical Clustering as a New Tool for the Interpretation of Complex Human Cancers

(2008) Sören-Oliver Deininger et al.   JOURNAL OF PROTEOME RESEARCH

MITICS (MALDI Imaging Team Imaging Computing System): A new open source mass spectrometry imaging software

(2008) Olivia Jardin-Mathé et al.   Journal of Proteomics

High-throughput proteomic analysis of formalin-fixed paraffin-embedded tissue microarrays using MALDI imaging mass spectrometry

(2008) M. Reid Groseclose et al.   PROTEOMICS