Clade-specific diversification dynamics of marine diatoms since the Jurassic

Multiple states in the late Eocene ocean circulation

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Quaternary deep-sea ostracods from the north-western Pacific Ocean: global biogeography and Drake-Passage, Tethyan, Central American and Arctic pathways

(2017) Moriaki Yasuhara et al.   JOURNAL OF SYSTEMATIC PALAEONTOLOGY

Detecting Environment-Dependent Diversification From Phylogenies: A Simulation Study and Some Empirical Illustrations

(2017) Eric Lewitus et al.   SYSTEMATIC BIOLOGY

Integrating Paleontological and Phylogenetic Approaches to Macroevolution

(2016) Gene Hunt et al.   Annual Review of Ecology Evolution and Systematics

Insights into global diatom distribution and diversity in the world’s ocean

(2016) Shruti Malviya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Combining marine macroecology and palaeoecology in understanding biodiversity: microfossils as a model

(2015) Moriaki Yasuhara et al.   BIOLOGICAL REVIEWS

Challenges in the estimation of extinction from molecular phylogenies: A response to Beaulieu and O'Meara

(2015) Daniel L. Rabosky   EVOLUTION

Tree of Life Reveals Clock-Like Speciation and Diversification

(2015) S. Blair Hedges et al.   MOLECULAR BIOLOGY AND EVOLUTION

Continental erosion and the Cenozoic rise of marine diatoms

(2015) Pedro Cermeño et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tara Oceans studies plankton at planetary scale

(2015) P. Bork et al.   SCIENCE

Characterizing and Comparing Phylogenies from their Laplacian Spectrum

(2015) Eric Lewitus et al.   SYSTEMATIC BIOLOGY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Cenozoic Planktonic Marine Diatom Diversity and Correlation to Climate Change

(2014) David Lazarus et al.   PLoS One

Macroevolutionary perspectives to environmental change

(2013) Fabien L. Condamine et al.   ECOLOGY LETTERS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

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Eocene cooling linked to early flow across the Tasmanian Gateway

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A NEW BAYESIAN METHOD FOR FITTING EVOLUTIONARY MODELS TO COMPARATIVE DATA WITH INTRASPECIFIC VARIATION

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Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

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Lithium Isotope History of Cenozoic Seawater: Changes in Silicate Weathering and Reverse Weathering

(2012) S. Misra et al.   SCIENCE

Evolution of Ocean Temperature and Ice Volume Through the Mid-Pleistocene Climate Transition

(2012) H. Elderfield et al.   SCIENCE

RAxML and FastTree: Comparing Two Methods for Large-Scale Maximum Likelihood Phylogeny Estimation

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Reconciling molecular phylogenies with the fossil record

(2011) H. Morlon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mammalian phylogeny reveals recent diversification rate shifts

(2011) T. Stadler   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phanerozoic Earth System Evolution and Marine Biodiversity

(2011) B. Hannisdal et al.   SCIENCE

Interplay Between Changing Climate and Species' Ecology Drives Macroevolutionary Dynamics

(2011) T. H. G. Ezard et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Geographical, environmental and intrinsic biotic controls on Phanerozoic marine diversification

(2010) JOHN ALROY   PALAEONTOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

The Chicxulub Asteroid Impact and Mass Extinction at the Cretaceous-Paleogene Boundary

(2010) P. Schulte et al.   SCIENCE

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

The limits of nuclear-encoded SSU rDNA for resolving the diatom phylogeny

(2009) Edward C. Theriot et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Diversity dynamics of marine planktonic diatoms across the Cenozoic

(2009) Daniel L. Rabosky et al.   NATURE

The life of diatoms in the world's oceans

(2009) E. Virginia Armbrust   NATURE

Radiolarians decreased silicification as an evolutionary response to reduced Cenozoic ocean silica availability

(2009) D. B. Lazarus et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Red Queen and the Court Jester: Species Diversity and the Role of Biotic and Abiotic Factors Through Time

(2009) M. J. Benton   SCIENCE

The rational exploration of microbial diversity

(2008) Christopher Quince et al.   ISME Journal

MOLECULAR EVIDENCE CONFIRMS SISTER RELATIONSHIP OFARDISSONEA,CLIMACOSPHENIA,ANDTOXARIUMWITHIN THE BIPOLAR CENTRIC DIATOMS (BACILLARIOPHYTA, MEDIOPHYCEAE), AND CLADISTIC ANALYSES CONFIRM THAT EXTREMELY ELONGATED SHAPE HAS ARISEN TWICE IN THE DIATOMS1

(2008) Linda K. Medlin et al.   JOURNAL OF PHYCOLOGY

An early Cenozoic perspective on greenhouse warming and carbon-cycle dynamics

(2008) James C. Zachos et al.   NATURE

Stepwise transition from the Eocene greenhouse to the Oligocene icehouse

(2008) Miriam E. Katz et al.   Nature Geoscience

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE

A long-term association between global temperature and biodiversity, origination and extinction in the fossil record

(2007) P. J Mayhew et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Global Diversity and Biogeography of Skeletonema Species (Bacillariophyta)

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