Multimodal Modeling of Neural Network Activity: Computing LFP, ECoG, EEG, and MEG Signals With LFPy 2.0

h-Type Membrane Current Shapes the Local Field Potential from Populations of Pyramidal Neurons

(2018) Torbjørn V. Ness et al.   JOURNAL OF NEUROSCIENCE

BioNet: A Python interface to NEURON for modeling large-scale networks

(2018) Sergey L. Gratiy et al.   PLoS One

Neural timing of stimulus events with microsecond precision

(2018) Jinhong Luo et al.   PLOS BIOLOGY

Corrected Four-Sphere Head Model for EEG Signals

(2017) Solveig Næss et al.   Frontiers in Human Neuroscience

Focal Local Field Potential Signature of the Single-Axon Monosynaptic Thalamocortical Connection

(2017) Espen Hagen et al.   JOURNAL OF NEUROSCIENCE

In Vivo Magnetic Recording of Neuronal Activity

(2017) Laure Caruso et al.   NEURON

An Evaluation of the Accuracy of Classical Models for Computing the Membrane Potential and Extracellular Potential for Neurons

(2017) Aslak Tveito et al.   Frontiers in Computational Neuroscience

Dipolar extracellular potentials generated by axonal projections

(2017) Thomas McColgan et al.   eLife

Revealing the distribution of transmembrane currents along the dendritic tree of a neuron from extracellular recordings

(2017) Dorottya Cserpán et al.   eLife

Propagation of spontaneous slow-wave activity across columns and layers of the adult rat barrel cortex in vivo

(2016) Vicente Reyes-Puerta et al.   Brain Structure & Function

Hybrid Scheme for Modeling Local Field Potentials from Point-Neuron Networks

(2016) Espen Hagen et al.   CEREBRAL CORTEX

Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience

(2016) Robert A. McDougal et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Neuronal coupling by endogenous electric fields: cable theory and applications to coincidence detector neurons in the auditory brain stem

(2016) Joshua H. Goldwyn et al.   JOURNAL OF NEUROPHYSIOLOGY

Active subthreshold dendritic conductances shape the local field potential

(2016) Torbjørn V. Ness et al.   JOURNAL OF PHYSIOLOGY-LONDON

The New York Head—A precise standardized volume conductor model for EEG source localization and tES targeting

(2016) Yu Huang et al.   NEUROIMAGE

Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim

(2016) Harilal Parasuram et al.   Frontiers in Computational Neuroscience

Local recording of biological magnetic fields using Giant Magneto Resistance-based micro-probes

(2016) Francesca Barbieri et al.   Scientific Reports

Biophysical Network Modelling of the dLGN Circuit: Different Effects of Triadic and Axonal Inhibition on Visual Responses of Relay Cells

(2016) Thomas Heiberg et al.   PLoS Computational Biology

Effect of Ionic Diffusion on Extracellular Potentials in Neural Tissue

(2016) Geir Halnes et al.   PLoS Computational Biology

Cell type specificity of neurovascular coupling in cerebral cortex

(2016) Hana Uhlirova et al.   eLife

Generalized Laminar Population Analysis (gLPA) for Interpretation of Multielectrode Data from Cortex

(2016) Helena T. Głąbska et al.   Frontiers in Neuroinformatics

Physically-based in silico light sheet microscopy for visualizing fluorescent brain models

(2015) Marwan Abdellah et al.   BMC BIOINFORMATICS

Reconstruction and Simulation of Neocortical Microcircuitry

(2015) Henry Markram et al.   CELL

Diversity of LFPs Activated in Different Target Regions by a Common CA3 Input

(2015) Gonzalo Martín-Vázquez et al.   CEREBRAL CORTEX

ViSAPy: A Python tool for biophysics-based generation of virtual spiking activity for evaluation of spike-sorting algorithms

(2015) Espen Hagen et al.   JOURNAL OF NEUROSCIENCE METHODS

Modelling and Analysis of Electrical Potentials Recorded in Microelectrode Arrays (MEAs)

(2015) Torbjørn V. Ness et al.   NEUROINFORMATICS

Local Field Potentials Encode Place Cell Ensemble Activation during Hippocampal Sharp Wave Ripples

(2015) Jiannis Taxidis et al.   NEURON

HCN channels enhance spike phase coherence and regulate the phase of spikes and LFPs in the theta-frequency range

(2015) Manisha Sinha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex

(2015) Srikanth Ramaswamy et al.   Frontiers in Neural Circuits

An algorithm to predict the connectome of neural microcircuits

(2015) Michael W. Reimann et al.   Frontiers in Computational Neuroscience

Computing the Local Field Potential (LFP) from Integrate-and-Fire Network Models

(2015) Alberto Mazzoni et al.   PLoS Computational Biology

Virtual Electrode Recording Tool for EXtracellular potentials (VERTEX): comparing multi-electrode recordings from simulated and biological mammalian cortical tissue

(2014) Richard J. Tomsett et al.   Brain Structure & Function

A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons

(2014) M. Almog et al.   JOURNAL OF NEUROSCIENCE

A guideline for head volume conductor modeling in EEG and MEG

(2014) Johannes Vorwerk et al.   NEUROIMAGE

Independent Components of Neural Activity Carry Information on Individual Populations

(2014) Helena Głąbska et al.   PLoS One

LFPy: a tool for biophysical simulation of extracellular potentials generated by detailed model neurons

(2014) Henrik Lindén et al.   Frontiers in Neuroinformatics

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2

(2014) Robert C. Cannon et al.   Frontiers in Neuroinformatics

MEG and EEG data analysis with MNE-Python

(2014) Alexandre Gramfort   Frontiers in Neuroscience

Modelling and analysis of local field potentials for studying the function of cortical circuits

(2013) Gaute T. Einevoll et al.   NATURE REVIEWS NEUROSCIENCE

A Detailed and Fast Model of Extracellular Recordings

(2013) Luis A. Camuñas-Mesa et al.   NEURAL COMPUTATION

MNE software for processing MEG and EEG data

(2013) Alexandre Gramfort et al.   NEUROIMAGE

A Biophysically Detailed Model of Neocortical Local Field Potentials Predicts the Critical Role of Active Membrane Currents

(2013) Michael W. Reimann et al.   NEURON

Theoretical Analysis of the Local Field Potential in Deep Brain Stimulation Applications

(2013) Scott F. Lempka et al.   PLoS One

Determining the True Polarity and Amplitude of Synaptic Currents Underlying Gamma Oscillations of Local Field Potentials

(2013) Gonzalo Martín-Vázquez et al.   PLoS One

Frequency Dependence of Signal Power and Spatial Reach of the Local Field Potential

(2013) Szymon Łęski et al.   PLoS Computational Biology

The Cell-Type Specific Cortical Microcircuit: Relating Structure and Activity in a Full-Scale Spiking Network Model

(2012) Tobias C. Potjans et al.   CEREBRAL CORTEX

The Spiking Component of Oscillatory Extracellular Potentials in the Rat Hippocampus

(2012) E. W. Schomburg et al.   JOURNAL OF NEUROSCIENCE

Computationally efficient simulation of extracellular recordings with multielectrode arrays

(2012) Palmi Thor Thorbergsson et al.   JOURNAL OF NEUROSCIENCE METHODS

The origin of extracellular fields and currents — EEG, ECoG, LFP and spikes

(2012) György Buzsáki et al.   NATURE REVIEWS NEUROSCIENCE

The Connection-set Algebra—A Novel Formalism for the Representation of Connectivity Structure in Neuronal Network Models

(2012) Mikael Djurfeldt   NEUROINFORMATICS

Imaging Calcium in Neurons

(2012) Christine Grienberger et al.   NEURON

Towards reliable spike-train recordings from thousands of neurons with multielectrodes

(2011) Gaute T Einevoll et al.   CURRENT OPINION IN NEUROBIOLOGY

Monte Carlo simulation of the spatial resolution and depth sensitivity of two-dimensional optical imaging of the brain

(2011) Peifang Tian et al.   JOURNAL OF BIOMEDICAL OPTICS

Ephaptic coupling of cortical neurons

(2011) Costas A Anastassiou et al.   NATURE NEUROSCIENCE

Inverse Current Source Density Method in Two Dimensions: Inferring Neural Activation from Multielectrode Recordings

(2011) Szymon Łęski et al.   NEUROINFORMATICS

Modeling the Spatial Reach of the LFP

(2011) Henrik Lindén et al.   NEURON

Models of Neocortical Layer 5b Pyramidal Cells Capturing a Wide Range of Dendritic and Perisomatic Active Properties

(2011) Etay Hay et al.   PLoS Computational Biology

Brainstorm: A User-Friendly Application for MEG/EEG Analysis

(2011) François Tadel et al.   Computational Intelligence and Neuroscience

On the Estimation of Population-Specific Synaptic Currents from Laminar Multielectrode Recordings

(2011) Sergey L. Gratiy et al.   Frontiers in Neuroinformatics

Experimental validation of the influence of white matter anisotropy on the intracranial EEG forward solution

(2010) Nitin B. Bangera et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Intrinsic dendritic filtering gives low-pass power spectra of local field potentials

(2010) Henrik Lindén et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

An Evaluation of the Conductivity Profile in the Somatosensory Barrel Cortex of Wistar Rats

(2010) Takakuni Goto et al.   JOURNAL OF NEUROPHYSIOLOGY

Do Electrode Properties Create a Problem in Interpreting Local Field Potential Recordings?

(2010) Matthew J. Nelson et al.   JOURNAL OF NEUROPHYSIOLOGY

A biophysical cortical column model to study the multi-component origin of the VSDI signal

(2010) S. Chemla et al.   NEUROIMAGE

Run-Time Interoperability Between Neuronal Network Simulators Based on the MUSIC Framework

(2010) Mikael Djurfeldt et al.   NEUROINFORMATICS

The low synaptic release probability in vivo

(2010) J. Gerard G. Borst   TRENDS IN NEUROSCIENCES

NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail

(2010) Padraig Gleeson et al.   PLoS Computational Biology

FieldTrip: Open Source Software for Advanced Analysis of MEG, EEG, and Invasive Electrophysiological Data

(2010) Robert Oostenveld et al.   Computational Intelligence and Neuroscience

Voltage-sensitive dye imaging: Technique review and models

(2009) S. Chemla et al.   JOURNAL OF PHYSIOLOGY-PARIS

NEURON and Python

(2009) Michael Hines   Frontiers in Neuroinformatics

Fully implicit parallel simulation of single neurons

(2008) Michael L. Hines et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Electrostatic potential of point charges inside dielectric prolate spheroids

(2008) Shaozhong Deng   JOURNAL OF ELECTROSTATICS

Review of signal distortion through metal microelectrode recording circuits and filters

(2008) Matthew J. Nelson et al.   JOURNAL OF NEUROSCIENCE METHODS

PyMOOSE: Interoperable scripting in Python for MOOSE

(2008) Upinder S. Bhalla   Frontiers in Neuroinformatics

Amplitude Variability and Extracellular Low-Pass Filtering of Neuronal Spikes

(2007) Klas H. Pettersen et al.   BIOPHYSICAL JOURNAL