Genomic Epidemiology of Campylobacter jejuni Transmission in Israel

Whole-genome sequencing of Campylobacter jejuni isolated from Danish routine human stool samples reveals surprising degree of clustering

(2018) K.G. Joensen et al.   CLINICAL MICROBIOLOGY AND INFECTION

Whole genome sequencing options for bacterial strain typing and epidemiologic analysis based on single nucleotide polymorphism versus gene-by-gene–based approaches

(2018) A.C. Schürch et al.   CLINICAL MICROBIOLOGY AND INFECTION

Genomics of foodborne pathogens for microbial food safety

(2018) Marc W Allard et al.   CURRENT OPINION IN BIOTECHNOLOGY

Characterization of Campylobacter jejuni and Campylobacter coli Broiler Isolates by Whole-Genome Sequencing

(2018) Guillermo Cantero et al.   Foodborne Pathogens and Disease

Shiga toxin-producing Escherichia coli O103:H2 outbreak in Germany after school trip to Austria due to raw cow milk, 2017 – The important role of international collaboration for outbreak investigations

(2018) Maren Mylius et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Real-time genomic investigation underlying the public health response to a Shiga toxin-producing Escherichia coli O26:H11 outbreak in a nursery

(2017) J. MORAN-GILAD et al.   EPIDEMIOLOGY AND INFECTION

Cross-border outbreak of listeriosis caused by cold-smoked salmon, revealed by integrated surveillance and whole genome sequencing (WGS), Denmark and France, 2015 to 2017

(2017) Susanne Schjørring et al.   Eurosurveillance

PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance

(2017) Celine Nadon et al.   Eurosurveillance

Whole genome sequencing (WGS) for food-borne pathogen surveillance and control – taking the pulse

(2017) Jacob Moran-Gilad   Eurosurveillance

Whole-Genome Sequencing in Epidemiology of Campylobacter jejuni Infections

(2017) Ann-Katrin Llarena et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Defining and Evaluating a Core Genome Multilocus Sequence Typing Scheme for Whole-Genome Sequence-Based Typing of Klebsiella pneumoniae

(2017) Haijian Zhou et al.   Frontiers in Microbiology

Implementation of Nationwide Real-time Whole-genome Sequencing to Enhance Listeriosis Outbreak Detection and Investigation

(2016) Brendan R. Jackson et al.   CLINICAL INFECTIOUS DISEASES

Molecular epidemiology of Campylobacter jejuni infection in Israel—a nationwide study

(2016) M. Weinberger et al.   CLINICAL MICROBIOLOGY AND INFECTION

Whole genome sequencing improved case ascertainment in an outbreak of Shiga toxin-producing Escherichia coli O157 associated with raw drinking milk

(2016) H. BUTCHER et al.   EPIDEMIOLOGY AND INFECTION

Risk Factors for Sporadic Infection With Campylobacter Spp. Among Children in Israel

(2016) Ravit Bassal et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL

Confirmation of a Campylobacteriosis Outbreak Associated with Chicken Liver Pâté Using PFGE and WGS

(2016) E. Lahti et al.   Zoonoses and Public Health

Genomic Epidemiology: Whole-Genome-Sequencing–Powered Surveillance and Outbreak Investigation of Foodborne Bacterial Pathogens

(2016) Xiangyu Deng et al.   Annual Review of Food Science and Technology

Partial Failure of Milk Pasteurization as a Risk for the Transmission ofCampylobacterFrom Cattle to Humans

(2015) Anand M. Fernandes et al.   CLINICAL INFECTIOUS DISEASES

Global Epidemiology of Campylobacter Infection

(2015) Nadeem O. Kaakoush et al.   CLINICAL MICROBIOLOGY REVIEWS

Campylobacter virulence and survival factors

(2015) Declan J. Bolton   FOOD MICROBIOLOGY

Distribution of Virulence-Associated Genes in a Selection ofCampylobacterIsolates

(2015) Leonard Koolman et al.   Foodborne Pathogens and Disease

Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections

(2015) Bethany L Dearlove et al.   ISME Journal

Molecular detection identified a type six secretion system inCampylobacter jejunifrom various sources but not from human cases

(2015) F. Siddiqui et al.   JOURNAL OF APPLIED MICROBIOLOGY

Prospective Whole-Genome Sequencing Enhances National Surveillance of Listeria monocytogenes

(2015) Jason C. Kwong et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Virulence characteristics of hcp + Campylobacter jejuni and Campylobacter coli isolates from retail chicken

(2015) Nicolae Corcionivoschi et al.   Gut Pathogens

Genomic Epidemiology of an Endoscope-Associated Outbreak of Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae

(2015) Jane W. Marsh et al.   PLoS One

Genome analysis of Campylobacter jejuni strains isolated from a waterborne outbreak

(2014) Joana Revez et al.   BMC GENOMICS

Multilocus Sequence Typing (MLST) and Whole-Genome MLST of Campylobacter jejuni Isolates from Human Infections in Three Districts during a Seasonal Peak in Finland

(2014) S. M. Kovanen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Prevalence of Type VI Secretion System in SpanishCampylobacter jejuniIsolates

(2014) M. Ugarte-Ruiz et al.   Zoonoses and Public Health

SRST2: Rapid genomic surveillance for public health and hospital microbiology labs

(2014) Michael Inouye et al.   Genome Medicine

Identification of a Functional Type VI Secretion System in Campylobacter jejuni Conferring Capsule Polysaccharide Sensitive Cytotoxicity

(2013) Nancy M. C. Bleumink-Pluym et al.   PLoS Pathogens

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Campylobacter jejuni Type VI Secretion System: Roles in Adaptation to Deoxycholic Acid, Host Cell Adherence, Invasion, and In Vivo Colonization

(2012) Kvin Lertpiriyapong et al.   PLoS One