Human Microbe-Disease Association Prediction With Graph Regularized Non-Negative Matrix Factorization
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Title
Human Microbe-Disease Association Prediction With Graph Regularized Non-Negative Matrix Factorization
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 9, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2018-11-01
DOI
10.3389/fmicb.2018.02560
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Related references
Note: Only part of the references are listed.- BNPMDA: Bipartite Network Projection for MiRNA–Disease Association prediction
- (2018) Xing Chen et al. BIOINFORMATICS
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- (2017) Yu-An Huang et al. Journal of Translational Medicine
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- (2017) Renyuan Gao et al. Obesity
- LRLSHMDA: Laplacian Regularized Least Squares for Human Microbe–Disease Association prediction
- (2017) Fan Wang et al. Scientific Reports
- LRSSLMDA: Laplacian Regularized Sparse Subspace Learning for MiRNA-Disease Association prediction
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- PBMDA: A novel and effective path-based computational model for miRNA-disease association prediction
- (2017) Zhu-Hong You et al. PLoS Computational Biology
- PBHMDA: Path-Based Human Microbe-Disease Association Prediction
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- Graph Regularized Non-Negative Low-Rank Matrix Factorization for Image Clustering
- (2017) Xuelong Li et al. IEEE Transactions on Cybernetics
- Is there a role for gut microbiota in type 1 diabetes pathogenesis?
- (2016) Stefano Bibbò et al. ANNALS OF MEDICINE
- A novel approach based on KATZ measure to predict associations of human microbiota with non-infectious diseases
- (2016) Xing Chen et al. BIOINFORMATICS
- An analysis of human microbe–disease associations
- (2016) Wei Ma et al. BRIEFINGS IN BIOINFORMATICS
- Environmental risk factors for type 1 diabetes
- (2016) Marian Rewers et al. LANCET
- Airway Microbiota in Severe Asthma and Relationship to Asthma Severity and Phenotypes
- (2016) Qingling Zhang et al. PLoS One
- NLLSS: Predicting Synergistic Drug Combinations Based on Semi-supervised Learning
- (2016) Xing Chen et al. PLoS Computational Biology
- Immune homeostasis, dysbiosis and therapeutic modulation of the gut microbiota
- (2015) C. T. Peterson et al. CLINICAL AND EXPERIMENTAL IMMUNOLOGY
- Sparse Non-negative Matrix Factorization (SNMF) based color unmixing for breast histopathological image analysis
- (2015) Jun Xu et al. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS
- Finding imaging patterns of structural covariance via Non-Negative Matrix Factorization
- (2015) Aristeidis Sotiras et al. NEUROIMAGE
- Predictive genomics: A cancer hallmark network framework for predicting tumor clinical phenotypes using genome sequencing data
- (2015) Edwin Wang et al. SEMINARS IN CANCER BIOLOGY
- The Role of Gluten in Celiac Disease and Type 1 Diabetes
- (2015) Gloria Serena et al. Nutrients
- Diet, Microbiota and Immune System in Type 1 Diabetes Development and Evolution
- (2015) María Mejía-León et al. Nutrients
- Periodontal pathogens Porphyromonas gingivalis and Fusobacterium nucleatum promote tumor progression in an oral-specific chemical carcinogenesis model
- (2015) Adi Binder Gallimidi et al. Oncotarget
- The Bacteroides fragilis Toxin Gene Is Prevalent in the Colon Mucosa of Colorectal Cancer Patients
- (2014) Annemarie Boleij et al. CLINICAL INFECTIOUS DISEASES
- Obesity and sudden death: visceral response?
- (2014) Kyndaron Reinier et al. HEART
- Association of Obesity with Serum Leptin, Adiponectin, and Serotonin and Gut Microflora in Beagle Dogs
- (2014) H.-J. Park et al. JOURNAL OF VETERINARY INTERNAL MEDICINE
- Clostridium ramosum Promotes High-Fat Diet-Induced Obesity in Gnotobiotic Mouse Models
- (2014) A. Woting et al. mBio
- Human symptoms–disease network
- (2014) XueZhong Zhou et al. Nature Communications
- Novel human lncRNA–disease association inference based on lncRNA expression profiles
- (2013) Xing Chen et al. BIOINFORMATICS
- Sputum microbiota in moderate versus severe patients with COPD
- (2013) A. Galiana et al. EUROPEAN RESPIRATORY JOURNAL
- Solving quasi-variational inequalities via their KKT conditions
- (2013) Francisco Facchinei et al. MATHEMATICAL PROGRAMMING
- Microbe–microbe interactions in mixed culture food fermentations
- (2012) Eddy J Smid et al. CURRENT OPINION IN BIOTECHNOLOGY
- A systems biology approach to studying the role of microbes in human health
- (2012) Ines Thiele et al. CURRENT OPINION IN BIOTECHNOLOGY
- Detecting overlapping protein complexes in protein-protein interaction networks
- (2012) Tamás Nepusz et al. NATURE METHODS
- Effects of Gut Microbes on Nutrient Absorption and Energy Regulation
- (2012) Rosa Krajmalnik-Brown et al. NUTRITION IN CLINICAL PRACTICE
- Gaussian interaction profile kernels for predicting drug–target interaction
- (2011) Twan van Laarhoven et al. BIOINFORMATICS
- Manifold Regularized Discriminative Nonnegative Matrix Factorization With Fast Gradient Descent
- (2011) Naiyang Guan et al. IEEE TRANSACTIONS ON IMAGE PROCESSING
- Targeting gut microbiota in obesity: effects of prebiotics and probiotics
- (2011) Nathalie M. Delzenne et al. Nature Reviews Endocrinology
- Gut Microbiome Metagenomics Analysis Suggests a Functional Model for the Development of Autoimmunity for Type 1 Diabetes
- (2011) Christopher T. Brown et al. PLoS One
- Graph Regularized Nonnegative Matrix Factorization for Data Representation
- (2010) Deng Cai et al. IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE
- Toward defining the autoimmune microbiome for type 1 diabetes
- (2010) Adriana Giongo et al. ISME Journal
- Importance of the methanogenic archaea populations in anaerobic wastewater treatments
- (2010) Meisam Tabatabaei et al. PROCESS BIOCHEMISTRY
- The Effects of Lactobacillus rhamnosus on the Prevention of Asthma in a Murine Model
- (2010) Jinho Yu et al. Allergy Asthma & Immunology Research
- Monitoring Bacterial Community of Human Gut Microbiota Reveals an Increase in Lactobacillus in Obese Patients and Methanogens in Anorexic Patients
- (2009) Fabrice Armougom et al. PLoS One
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