Root Microbiota in Primary and Secondary Apical Periodontitis

Whole-genome sequencing based characterization of antimicrobial resistance in Enterococcus

(2018) Gregory H Tyson et al.   Pathogens and Disease

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pyrosequencing Analysis of Cryogenically Ground Samples from Primary and Secondary/Persistent Endodontic Infections

(2017) Cangül Keskin et al.   JOURNAL OF ENDODONTICS

Analysis ofFusobacteriumpersistence and antibiotic response in colorectal cancer

(2017) Susan Bullman et al.   SCIENCE

Direct PCR Offers a Fast and Reliable Alternative to Conventional DNA Isolation Methods for Gut Microbiomes

(2017) Elin Videvall et al.   mSystems

Dysbiosis in chronic periodontitis: Key microbial players and interactions with the human host

(2017) Zhi-Luo Deng et al.   Scientific Reports

Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR

(2016) Vladimir Lazarevic et al.   BMC MICROBIOLOGY

Association between Systemic Diseases and Apical Periodontitis

(2016) Navid Khalighinejad et al.   JOURNAL OF ENDODONTICS

Enterococcus faecalis from Food, Clinical Specimens, and Oral Sites: Prevalence of Virulence Factors in Association with Biofilm Formation

(2016) Annette C. Anderson et al.   Frontiers in Microbiology

Microbiome of Deep Dentinal Caries Lesions in Teeth with Symptomatic Irreversible Pulpitis

(2016) Isabela N. Rôças et al.   PLoS One

Comparison of Bacterial Community Composition of Primary and Persistent Endodontic Infections Using Pyrosequencing

(2015) Giorgos N. Tzanetakis et al.   JOURNAL OF ENDODONTICS

Total and Specific Bacterial Levels in the Apical Root Canal System of Teeth with Post-treatment Apical Periodontitis

(2015) Henrique S. Antunes et al.   JOURNAL OF ENDODONTICS

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Microbial Analysis in Primary and Persistent Endodontic Infections by Using Pyrosequencing

(2013) Bo-Young Hong et al.   JOURNAL OF ENDODONTICS

Susceptibility of As-yet-uncultivated and Difficult-to-culture Bacteria to Chemomechanical Procedures

(2013) Isabela N. Rôças et al.   JOURNAL OF ENDODONTICS

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Ecology of the microbiome of the infected root canal system: a comparison between apical and coronal root segments

(2012) A. R. Özok et al.   INTERNATIONAL ENDODONTIC JOURNAL

Characterization of Microbiota of Root Canal-Treated Teeth with Posttreatment Disease

(2012) I. N. Rocas et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Comprehensive Analysis of Secondary Dental Root Canal Infections: A Combination of Culture and Culture-Independent Approaches Reveals New Insights

(2012) Annette Carola Anderson et al.   PLoS One

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Pyrosequencing Analysis of the Apical Root Canal Microbiota

(2011) José F. Siqueira et al.   JOURNAL OF ENDODONTICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

(2010) T. Chen et al.   Database-The Journal of Biological Databases and Curation

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The mysterious appearance of enterococci in filled root canals

(2009) M. Zehnder et al.   INTERNATIONAL ENDODONTIC JOURNAL

Pyrosequencing analysis of the Oral Microflora of healthy adults

(2009) B.J.F. Keijser et al.   JOURNAL OF DENTAL RESEARCH

Metagenomic study of the oral microbiota by Illumina high-throughput sequencing

(2009) Vladimir Lazarevic et al.   JOURNAL OF MICROBIOLOGICAL METHODS