- Home
- Publications
- Publication Search
- Publication Details
Title
The elemental mechanism of transcriptional pausing
Authors
Keywords
-
Journal
eLife
Volume 8, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2019-01-08
DOI
10.7554/elife.40981
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators
- (2018) Jin Young Kang et al. CELL
- RNA Polymerase Accommodates a Pause RNA Hairpin by Global Conformational Rearrangements that Prolong Pausing
- (2018) Jin Young Kang et al. MOLECULAR CELL
- Structural Basis for NusA Stabilized Transcriptional Pausing
- (2018) Xieyang Guo et al. MOLECULAR CELL
- Pause sequences facilitate entry into long-lived paused states by reducing RNA polymerase transcription rates
- (2018) Ronen Gabizon et al. Nature Communications
- Structure of paused transcription complex Pol II–DSIF–NELF
- (2018) Seychelle M. Vos et al. NATURE
- Active site closure stabilizes the backtracked state of RNA polymerase
- (2018) Matti Turtola et al. NUCLEIC ACIDS RESEARCH
- Time-resolved cryo-electron microscopy: Recent progress
- (2017) Joachim Frank JOURNAL OF STRUCTURAL BIOLOGY
- Trigger loop of RNA polymerase is a positional, not acid–base, catalyst for both transcription and proofreading
- (2017) Tatiana V. Mishanina et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway
- (2017) Katsuhiko S. Murakami et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structural basis of transcription arrest by coliphage HK022 Nun in an Escherichia coli RNA polymerase elongation complex
- (2017) Jin Young Kang et al. eLife
- Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation
- (2017) Hannah Steinert et al. eLife
- Structure and function of the mycobacterial transcription initiation complex with the essential regulator RbpA
- (2017) Elizabeth A Hubin et al. eLife
- NusG Is a Sequence-specific RNA Polymerase Pause Factor That Binds to the Non-template DNA within the Paused Transcription Bubble
- (2016) Alexander V. Yakhnin et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Bayesian Markov models consistently outperform PWMs at predicting motifs in nucleotide sequences
- (2016) Matthias Siebert et al. NUCLEIC ACIDS RESEARCH
- Structures ofE.coliσS-transcription initiation complexes provide new insights into polymerase mechanism
- (2016) Bin Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
- (2016) Bo Shu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- ppGpp couples transcription to DNA repair in E. coli
- (2016) V. Kamarthapu et al. SCIENCE
- Transcriptional termination in mammals: Stopping the RNA polymerase II juggernaut
- (2016) N. J. Proudfoot SCIENCE
- A Two-Way Street: Regulatory Interplay between RNA Polymerase and Nascent RNA Structure
- (2016) Jinwei Zhang et al. TRENDS IN BIOCHEMICAL SCIENCES
- The Ratcheted and Ratchetable Structural States of RNA Polymerase Underlie Multiple Transcriptional Functions
- (2015) Shun-ichi Sekine et al. MOLECULAR CELL
- Genome-wide study of mRNA degradation and transcript elongation in Escherichia coli
- (2015) H. Chen et al. Molecular Systems Biology
- Getting up to speed with transcription elongation by RNA polymerase II
- (2015) Iris Jonkers et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Two transcription pause elements underlie a σ70-dependent pause cycle
- (2015) Eric J. Strobel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Trigger loop folding determines transcription rate ofEscherichia coli’sRNA polymerase
- (2015) Yara X. Mejia et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RNA polymerase pausing and nascent-RNA structure formation are linked through clamp-domain movement
- (2014) Pyae P Hein et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Trigger-helix folding pathway and SI3 mediate catalysis and hairpin-stabilized pausing by Escherichia coli RNA polymerase
- (2014) Tricia A. Windgassen et al. NUCLEIC ACIDS RESEARCH
- A pause sequence enriched at translation start sites drives transcription dynamics in vivo
- (2014) M. H. Larson et al. SCIENCE
- Interactions between RNA polymerase and the "core recognition element" counteract pausing
- (2014) I. O. Vvedenskaya et al. SCIENCE
- CBR antimicrobials alter coupling between the bridge helix and the β subunit in RNA polymerase
- (2014) Anssi M. Malinen et al. Nature Communications
- Structural Basis of Transcriptional Pausing in Bacteria
- (2013) Albert Weixlbaumer et al. CELL
- Control of Transcriptional Fidelity by Active Center Tuning as Derived from RNA Polymerase Endonuclease Reaction
- (2013) Ekaterina Sosunova et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Cys-Pair Reporters Detect a Constrained Trigger Loop in a Paused RNA Polymerase
- (2013) Dhananjaya Nayak et al. MOLECULAR CELL
- Complete dissection of transcription elongation reveals slow translocation of RNA polymerase II in a linear ratchet mechanism
- (2013) Manchuta Dangkulwanich et al. eLife
- Intrinsic Translocation Barrier as an Initial Step in Pausing by RNA Polymerase II
- (2012) Masahiko Imashimizu et al. JOURNAL OF MOLECULAR BIOLOGY
- Active site opening and closure control translocation of multisubunit RNA polymerase
- (2012) Anssi M. Malinen et al. NUCLEIC ACIDS RESEARCH
- A Unified Model of Transcription Elongation: What Have We Learned from Single-Molecule Experiments?
- (2011) Dáibhid Ó Maoiléidigh et al. BIOPHYSICAL JOURNAL
- Factor-independent transcription pausing caused by recognition of the RNA-DNA hybrid sequence
- (2011) Aleksandra Bochkareva et al. EMBO JOURNAL
- Cooperation Between Translating Ribosomes and RNA Polymerase in Transcription Elongation
- (2010) S. Proshkin et al. SCIENCE
- Role of the RNA polymerase trigger loop in catalysis and pausing
- (2009) Jinwei Zhang et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Mechanism of sequence-specific pausing of bacterial RNA polymerase
- (2009) M. L. Kireeva et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structural Basis of Transcription: Backtracked RNA Polymerase II at 3.4 Angstrom Resolution
- (2009) D. Wang et al. SCIENCE
- Global Kinetic Explorer: A new computer program for dynamic simulation and fitting of kinetic data
- (2008) Kenneth A. Johnson et al. ANALYTICAL BIOCHEMISTRY
- Structural basis of transcription inhibition by α-amanitin and implications for RNA polymerase II translocation
- (2008) Florian Brueckner et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started